Gene : Eucgr.G02588 E. grandis v2.0
Defline:  (1 of 1) PTHR12265:SF0 - TRANSMEMBRANE PROTEIN 53 Genomic Order:  2106
Name:  ? Eucgr.G02588 Secondary Identifier:  ? PAC:32073109
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02588 0.5kb upstream 0.5kb upstream 4410 true Chr07: 46611169-46615578 Eucalyptus grandis
Eucgr.G02588 0.5kb upstream 0.5kb upstream 500 false Chr07: 46611169-46611668 Eucalyptus grandis
Eucgr.G02588 0.5kb downstream 0.5kb downstream 4410 true Chr07: 46611669-46616078 Eucalyptus grandis
Eucgr.G02588 0.5kb downstream 0.5kb downstream 500 false Chr07: 46615579-46616078 Eucalyptus grandis
Eucgr.G02588 1.0kb upstream 1.0kb upstream 4910 true Chr07: 46610669-46615578 Eucalyptus grandis
Eucgr.G02588 1.0kb upstream 1.0kb upstream 1000 false Chr07: 46610669-46611668 Eucalyptus grandis
Eucgr.G02588 1.0kb downstream 1.0kb downstream 4910 true Chr07: 46611669-46616578 Eucalyptus grandis
Eucgr.G02588 1.0kb downstream 1.0kb downstream 1000 false Chr07: 46615579-46616578 Eucalyptus grandis
Eucgr.G02588 2.0kb upstream 2.0kb upstream 5910 true Chr07: 46609669-46615578 Eucalyptus grandis
Eucgr.G02588 2.0kb upstream 2.0kb upstream 2000 false Chr07: 46609669-46611668 Eucalyptus grandis
Eucgr.G02588 2.0kb downstream 2.0kb downstream 5910 true Chr07: 46611669-46617578 Eucalyptus grandis
Eucgr.G02588 2.0kb downstream 2.0kb downstream 2000 false Chr07: 46615579-46617578 Eucalyptus grandis
Eucgr.G02588 5.0kb upstream 5.0kb upstream 8910 true Chr07: 46606669-46615578 Eucalyptus grandis
Eucgr.G02588 5.0kb upstream 5.0kb upstream 5000 false Chr07: 46606669-46611668 Eucalyptus grandis
Eucgr.G02588 5.0kb downstream 5.0kb downstream 8910 true Chr07: 46611669-46620578 Eucalyptus grandis
Eucgr.G02588 5.0kb downstream 5.0kb downstream 5000 false Chr07: 46615579-46620578 Eucalyptus grandis
Eucgr.G02588 10.0kb upstream 10.0kb upstream 13910 true Chr07: 46601669-46615578 Eucalyptus grandis
Eucgr.G02588 10.0kb upstream 10.0kb upstream 10000 false Chr07: 46601669-46611668 Eucalyptus grandis
Eucgr.G02588 10.0kb downstream 10.0kb downstream 13910 true Chr07: 46611669-46625578 Eucalyptus grandis
Eucgr.G02588 10.0kb downstream 10.0kb downstream 10000 false Chr07: 46615579-46625578 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067477 5270 Rosid View MSA
123747198 5271 Pentapetalae View MSA
122786778 5272 Eudicot View MSA
122048979 5273 Angiosperm View MSA
121347494 5274 Embryophyte View MSA
123425038 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.5249 0.0 34.6095    
cufflinks 74.878 0.0 172.136 High  
cufflinks 24.7924 0.0 54.8279    
cufflinks 41.2972 0.0 92.0974 High  
cufflinks 90.209 0.0 209.832 High High
cufflinks 8.2559 0.0 19.0837   Low

0 Strain