Gene : Eucgr.G02584 E. grandis v2.0
Defline:  (1 of 1) PTHR11404:SF17 - SUPEROXIDE DISMUTASE [FE] 3, CHLOROPLASTIC Genomic Order:  2102
Name:  ? Eucgr.G02584 Secondary Identifier:  ? PAC:32070777
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis DETOX1-PWY Eucalyptus grandis pathologic  
Egrandis DETOX1-PWY-1 Eucalyptus grandis pathologic  
Egrandis PWY-6854 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02584 0.5kb upstream 0.5kb upstream 5553 true Chr07: 46575756-46581308 Eucalyptus grandis
Eucgr.G02584 0.5kb upstream 0.5kb upstream 500 false Chr07: 46575756-46576255 Eucalyptus grandis
Eucgr.G02584 0.5kb downstream 0.5kb downstream 5553 true Chr07: 46576256-46581808 Eucalyptus grandis
Eucgr.G02584 0.5kb downstream 0.5kb downstream 500 false Chr07: 46581309-46581808 Eucalyptus grandis
Eucgr.G02584 1.0kb upstream 1.0kb upstream 6053 true Chr07: 46575256-46581308 Eucalyptus grandis
Eucgr.G02584 1.0kb upstream 1.0kb upstream 1000 false Chr07: 46575256-46576255 Eucalyptus grandis
Eucgr.G02584 1.0kb downstream 1.0kb downstream 6053 true Chr07: 46576256-46582308 Eucalyptus grandis
Eucgr.G02584 1.0kb downstream 1.0kb downstream 1000 false Chr07: 46581309-46582308 Eucalyptus grandis
Eucgr.G02584 2.0kb upstream 2.0kb upstream 7053 true Chr07: 46574256-46581308 Eucalyptus grandis
Eucgr.G02584 2.0kb upstream 2.0kb upstream 2000 false Chr07: 46574256-46576255 Eucalyptus grandis
Eucgr.G02584 2.0kb downstream 2.0kb downstream 7053 true Chr07: 46576256-46583308 Eucalyptus grandis
Eucgr.G02584 2.0kb downstream 2.0kb downstream 2000 false Chr07: 46581309-46583308 Eucalyptus grandis
Eucgr.G02584 5.0kb upstream 5.0kb upstream 10053 true Chr07: 46571256-46581308 Eucalyptus grandis
Eucgr.G02584 5.0kb upstream 5.0kb upstream 5000 false Chr07: 46571256-46576255 Eucalyptus grandis
Eucgr.G02584 5.0kb downstream 5.0kb downstream 10053 true Chr07: 46576256-46586308 Eucalyptus grandis
Eucgr.G02584 5.0kb downstream 5.0kb downstream 5000 false Chr07: 46581309-46586308 Eucalyptus grandis
Eucgr.G02584 10.0kb upstream 10.0kb upstream 15053 true Chr07: 46566256-46581308 Eucalyptus grandis
Eucgr.G02584 10.0kb upstream 10.0kb upstream 10000 false Chr07: 46566256-46576255 Eucalyptus grandis
Eucgr.G02584 10.0kb downstream 10.0kb downstream 15053 true Chr07: 46576256-46591308 Eucalyptus grandis
Eucgr.G02584 10.0kb downstream 10.0kb downstream 10000 false Chr07: 46581309-46591308 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067465 5270 Rosid View MSA
123740223 5271 Pentapetalae View MSA
122788752 5272 Eudicot View MSA
122044976 5273 Angiosperm View MSA
121351401 5274 Embryophyte View MSA
123425969 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.7336 0.0 34.035    
cufflinks 3.33705 0.0 9.35516   Low
cufflinks 10.0483 0.0 27.9422    
cufflinks 5.73087 0.0 14.6924    
cufflinks 13.2684 0.0 36.1339    
cufflinks 22.0188 0.0 51.4286   High

0 Strain