Gene : Eucgr.G02552 E. grandis v2.0
Defline:  (1 of 5) PF13426 - PAS domain (PAS_9) Genomic Order:  2070
Name:  ? Eucgr.G02552 Secondary Identifier:  ? PAC:32072620
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02552 0.5kb upstream 0.5kb upstream 4682 true Chr07: 46330567-46335248 Eucalyptus grandis
Eucgr.G02552 0.5kb upstream 0.5kb upstream 500 false Chr07: 46330567-46331066 Eucalyptus grandis
Eucgr.G02552 0.5kb downstream 0.5kb downstream 4682 true Chr07: 46331067-46335748 Eucalyptus grandis
Eucgr.G02552 0.5kb downstream 0.5kb downstream 500 false Chr07: 46335249-46335748 Eucalyptus grandis
Eucgr.G02552 1.0kb upstream 1.0kb upstream 5182 true Chr07: 46330067-46335248 Eucalyptus grandis
Eucgr.G02552 1.0kb upstream 1.0kb upstream 1000 false Chr07: 46330067-46331066 Eucalyptus grandis
Eucgr.G02552 1.0kb downstream 1.0kb downstream 5182 true Chr07: 46331067-46336248 Eucalyptus grandis
Eucgr.G02552 1.0kb downstream 1.0kb downstream 1000 false Chr07: 46335249-46336248 Eucalyptus grandis
Eucgr.G02552 2.0kb upstream 2.0kb upstream 6182 true Chr07: 46329067-46335248 Eucalyptus grandis
Eucgr.G02552 2.0kb upstream 2.0kb upstream 2000 false Chr07: 46329067-46331066 Eucalyptus grandis
Eucgr.G02552 2.0kb downstream 2.0kb downstream 6182 true Chr07: 46331067-46337248 Eucalyptus grandis
Eucgr.G02552 2.0kb downstream 2.0kb downstream 2000 false Chr07: 46335249-46337248 Eucalyptus grandis
Eucgr.G02552 5.0kb upstream 5.0kb upstream 9182 true Chr07: 46326067-46335248 Eucalyptus grandis
Eucgr.G02552 5.0kb upstream 5.0kb upstream 5000 false Chr07: 46326067-46331066 Eucalyptus grandis
Eucgr.G02552 5.0kb downstream 5.0kb downstream 9182 true Chr07: 46331067-46340248 Eucalyptus grandis
Eucgr.G02552 5.0kb downstream 5.0kb downstream 5000 false Chr07: 46335249-46340248 Eucalyptus grandis
Eucgr.G02552 10.0kb upstream 10.0kb upstream 14182 true Chr07: 46321067-46335248 Eucalyptus grandis
Eucgr.G02552 10.0kb upstream 10.0kb upstream 10000 false Chr07: 46321067-46331066 Eucalyptus grandis
Eucgr.G02552 10.0kb downstream 10.0kb downstream 14182 true Chr07: 46331067-46345248 Eucalyptus grandis
Eucgr.G02552 10.0kb downstream 10.0kb downstream 10000 false Chr07: 46335249-46345248 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063495 5270 Rosid View MSA
123740097 5271 Pentapetalae View MSA
122769970 5272 Eudicot View MSA
122045856 5273 Angiosperm View MSA
121348460 5274 Embryophyte View MSA
123424929 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.7077 0.0 112.368 High  
cufflinks 13.159 0.0 39.0396    
cufflinks 22.6278 0.0 68.6548    
cufflinks 12.7597 0.0 40.785    
cufflinks 37.4973 0.0 101.159    
cufflinks 118.945 0.0 367.876 High High

0 Strain