Gene : Eucgr.G02513 E. grandis v2.0
Defline:  (1 of 1) PTHR35476:SF2 - MUCIN-RELATED PROTEIN Genomic Order:  2035
Name:  ? Eucgr.G02513 Secondary Identifier:  ? PAC:32070347
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02513 0.5kb upstream 0.5kb upstream 3848 true Chr07: 45898332-45902179 Eucalyptus grandis
Eucgr.G02513 0.5kb upstream 0.5kb upstream 500 false Chr07: 45901680-45902179 Eucalyptus grandis
Eucgr.G02513 0.5kb downstream 0.5kb downstream 3848 true Chr07: 45897832-45901679 Eucalyptus grandis
Eucgr.G02513 0.5kb downstream 0.5kb downstream 500 false Chr07: 45897832-45898331 Eucalyptus grandis
Eucgr.G02513 1.0kb upstream 1.0kb upstream 4348 true Chr07: 45898332-45902679 Eucalyptus grandis
Eucgr.G02513 1.0kb upstream 1.0kb upstream 1000 false Chr07: 45901680-45902679 Eucalyptus grandis
Eucgr.G02513 1.0kb downstream 1.0kb downstream 4348 true Chr07: 45897332-45901679 Eucalyptus grandis
Eucgr.G02513 1.0kb downstream 1.0kb downstream 1000 false Chr07: 45897332-45898331 Eucalyptus grandis
Eucgr.G02513 2.0kb upstream 2.0kb upstream 5348 true Chr07: 45898332-45903679 Eucalyptus grandis
Eucgr.G02513 2.0kb upstream 2.0kb upstream 2000 false Chr07: 45901680-45903679 Eucalyptus grandis
Eucgr.G02513 2.0kb downstream 2.0kb downstream 5348 true Chr07: 45896332-45901679 Eucalyptus grandis
Eucgr.G02513 2.0kb downstream 2.0kb downstream 2000 false Chr07: 45896332-45898331 Eucalyptus grandis
Eucgr.G02513 5.0kb upstream 5.0kb upstream 8348 true Chr07: 45898332-45906679 Eucalyptus grandis
Eucgr.G02513 5.0kb upstream 5.0kb upstream 5000 false Chr07: 45901680-45906679 Eucalyptus grandis
Eucgr.G02513 5.0kb downstream 5.0kb downstream 8348 true Chr07: 45893332-45901679 Eucalyptus grandis
Eucgr.G02513 5.0kb downstream 5.0kb downstream 5000 false Chr07: 45893332-45898331 Eucalyptus grandis
Eucgr.G02513 10.0kb upstream 10.0kb upstream 13348 true Chr07: 45898332-45911679 Eucalyptus grandis
Eucgr.G02513 10.0kb upstream 10.0kb upstream 10000 false Chr07: 45901680-45911679 Eucalyptus grandis
Eucgr.G02513 10.0kb downstream 10.0kb downstream 13348 true Chr07: 45888332-45901679 Eucalyptus grandis
Eucgr.G02513 10.0kb downstream 10.0kb downstream 10000 false Chr07: 45888332-45898331 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041068 5273 Angiosperm View MSA
124067494 5270 Rosid View MSA
123738952 5271 Pentapetalae View MSA
122792468 5272 Eudicot View MSA
121349473 5274 Embryophyte View MSA
123424597 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.77696 0.0 14.2712    
cufflinks 3.08195 0.0 8.14368    
cufflinks 5.49648 0.0 13.6635    
cufflinks 2.56744 0.0 6.87339   Low
cufflinks 6.26392 0.0 15.4003    
cufflinks 10.3983 0.0 24.2034   High

0 Strain