Gene : Eucgr.G02501 E. grandis v2.0
Defline:  (1 of 1) PTHR22950//PTHR22950:SF246 - AMINO ACID TRANSPORTER Genomic Order:  2023
Name:  ? Eucgr.G02501 Secondary Identifier:  ? PAC:32072015
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02501 0.5kb upstream 0.5kb upstream 1736 true Chr07: 45825429-45827164 Eucalyptus grandis
Eucgr.G02501 0.5kb upstream 0.5kb upstream 500 false Chr07: 45826665-45827164 Eucalyptus grandis
Eucgr.G02501 0.5kb downstream 0.5kb downstream 1736 true Chr07: 45824929-45826664 Eucalyptus grandis
Eucgr.G02501 0.5kb downstream 0.5kb downstream 500 false Chr07: 45824929-45825428 Eucalyptus grandis
Eucgr.G02501 1.0kb upstream 1.0kb upstream 2236 true Chr07: 45825429-45827664 Eucalyptus grandis
Eucgr.G02501 1.0kb upstream 1.0kb upstream 1000 false Chr07: 45826665-45827664 Eucalyptus grandis
Eucgr.G02501 1.0kb downstream 1.0kb downstream 2236 true Chr07: 45824429-45826664 Eucalyptus grandis
Eucgr.G02501 1.0kb downstream 1.0kb downstream 1000 false Chr07: 45824429-45825428 Eucalyptus grandis
Eucgr.G02501 2.0kb upstream 2.0kb upstream 3236 true Chr07: 45825429-45828664 Eucalyptus grandis
Eucgr.G02501 2.0kb upstream 2.0kb upstream 2000 false Chr07: 45826665-45828664 Eucalyptus grandis
Eucgr.G02501 2.0kb downstream 2.0kb downstream 3236 true Chr07: 45823429-45826664 Eucalyptus grandis
Eucgr.G02501 2.0kb downstream 2.0kb downstream 2000 false Chr07: 45823429-45825428 Eucalyptus grandis
Eucgr.G02501 5.0kb upstream 5.0kb upstream 6236 true Chr07: 45825429-45831664 Eucalyptus grandis
Eucgr.G02501 5.0kb upstream 5.0kb upstream 5000 false Chr07: 45826665-45831664 Eucalyptus grandis
Eucgr.G02501 5.0kb downstream 5.0kb downstream 6236 true Chr07: 45820429-45826664 Eucalyptus grandis
Eucgr.G02501 5.0kb downstream 5.0kb downstream 5000 false Chr07: 45820429-45825428 Eucalyptus grandis
Eucgr.G02501 10.0kb upstream 10.0kb upstream 11236 true Chr07: 45825429-45836664 Eucalyptus grandis
Eucgr.G02501 10.0kb upstream 10.0kb upstream 10000 false Chr07: 45826665-45836664 Eucalyptus grandis
Eucgr.G02501 10.0kb downstream 10.0kb downstream 11236 true Chr07: 45815429-45826664 Eucalyptus grandis
Eucgr.G02501 10.0kb downstream 10.0kb downstream 10000 false Chr07: 45815429-45825428 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041365 5273 Angiosperm View MSA
124070612 5270 Rosid View MSA
123742441 5271 Pentapetalae View MSA
122795032 5272 Eudicot View MSA
123429000 5275 Viridiplantae View MSA
121349038 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.717409 0.0 2.31554    
cufflinks 1.49437 0.0 4.42223   High
cufflinks 0.493427 0.0 1.68538    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain