Gene : Eucgr.G02478 E. grandis v2.0
Defline:  (1 of 7) PTHR31741:SF3 - O-FUCOSYLTRANSFERASE-LIKE PROTEIN Genomic Order:  2000
Name:  ? Eucgr.G02478 Secondary Identifier:  ? PAC:32072590
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02478 0.5kb upstream 0.5kb upstream 6642 true Chr07: 45636831-45643472 Eucalyptus grandis
Eucgr.G02478 0.5kb upstream 0.5kb upstream 500 false Chr07: 45636831-45637330 Eucalyptus grandis
Eucgr.G02478 0.5kb downstream 0.5kb downstream 6642 true Chr07: 45637331-45643972 Eucalyptus grandis
Eucgr.G02478 0.5kb downstream 0.5kb downstream 500 false Chr07: 45643473-45643972 Eucalyptus grandis
Eucgr.G02478 1.0kb upstream 1.0kb upstream 7142 true Chr07: 45636331-45643472 Eucalyptus grandis
Eucgr.G02478 1.0kb upstream 1.0kb upstream 1000 false Chr07: 45636331-45637330 Eucalyptus grandis
Eucgr.G02478 1.0kb downstream 1.0kb downstream 7142 true Chr07: 45637331-45644472 Eucalyptus grandis
Eucgr.G02478 1.0kb downstream 1.0kb downstream 1000 false Chr07: 45643473-45644472 Eucalyptus grandis
Eucgr.G02478 2.0kb upstream 2.0kb upstream 8142 true Chr07: 45635331-45643472 Eucalyptus grandis
Eucgr.G02478 2.0kb upstream 2.0kb upstream 2000 false Chr07: 45635331-45637330 Eucalyptus grandis
Eucgr.G02478 2.0kb downstream 2.0kb downstream 8142 true Chr07: 45637331-45645472 Eucalyptus grandis
Eucgr.G02478 2.0kb downstream 2.0kb downstream 2000 false Chr07: 45643473-45645472 Eucalyptus grandis
Eucgr.G02478 5.0kb upstream 5.0kb upstream 11142 true Chr07: 45632331-45643472 Eucalyptus grandis
Eucgr.G02478 5.0kb upstream 5.0kb upstream 5000 false Chr07: 45632331-45637330 Eucalyptus grandis
Eucgr.G02478 5.0kb downstream 5.0kb downstream 11142 true Chr07: 45637331-45648472 Eucalyptus grandis
Eucgr.G02478 5.0kb downstream 5.0kb downstream 5000 false Chr07: 45643473-45648472 Eucalyptus grandis
Eucgr.G02478 10.0kb upstream 10.0kb upstream 16142 true Chr07: 45627331-45643472 Eucalyptus grandis
Eucgr.G02478 10.0kb upstream 10.0kb upstream 10000 false Chr07: 45627331-45637330 Eucalyptus grandis
Eucgr.G02478 10.0kb downstream 10.0kb downstream 16142 true Chr07: 45637331-45653472 Eucalyptus grandis
Eucgr.G02478 10.0kb downstream 10.0kb downstream 10000 false Chr07: 45643473-45653472 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072479 5270 Rosid View MSA
123747295 5271 Pentapetalae View MSA
122788549 5272 Eudicot View MSA
122046099 5273 Angiosperm View MSA
121348832 5274 Embryophyte View MSA
123381034 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.709 0.0 17.6355    
cufflinks 14.2155 0.0 31.5676    
cufflinks 6.8533 0.0 15.795    
cufflinks 26.2856 0.0 58.2483   High
cufflinks 18.8536 0.0 41.711    
cufflinks 7.19921 0.0 16.5776    

0 Strain