Gene : Eucgr.G02422 E. grandis v2.0
Defline:  (1 of 1) PTHR10741:SF5 - TRANSLIN-ASSOCIATED PROTEIN X Genomic Order:  1947
Name:  ? Eucgr.G02422 Secondary Identifier:  ? PAC:32072159
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02422 0.5kb upstream 0.5kb upstream 3678 true Chr07: 45169940-45173617 Eucalyptus grandis
Eucgr.G02422 0.5kb upstream 0.5kb upstream 500 false Chr07: 45169940-45170439 Eucalyptus grandis
Eucgr.G02422 0.5kb downstream 0.5kb downstream 3678 true Chr07: 45170440-45174117 Eucalyptus grandis
Eucgr.G02422 0.5kb downstream 0.5kb downstream 500 false Chr07: 45173618-45174117 Eucalyptus grandis
Eucgr.G02422 1.0kb upstream 1.0kb upstream 4178 true Chr07: 45169440-45173617 Eucalyptus grandis
Eucgr.G02422 1.0kb upstream 1.0kb upstream 1000 false Chr07: 45169440-45170439 Eucalyptus grandis
Eucgr.G02422 1.0kb downstream 1.0kb downstream 4178 true Chr07: 45170440-45174617 Eucalyptus grandis
Eucgr.G02422 1.0kb downstream 1.0kb downstream 1000 false Chr07: 45173618-45174617 Eucalyptus grandis
Eucgr.G02422 2.0kb upstream 2.0kb upstream 5178 true Chr07: 45168440-45173617 Eucalyptus grandis
Eucgr.G02422 2.0kb upstream 2.0kb upstream 2000 false Chr07: 45168440-45170439 Eucalyptus grandis
Eucgr.G02422 2.0kb downstream 2.0kb downstream 5178 true Chr07: 45170440-45175617 Eucalyptus grandis
Eucgr.G02422 2.0kb downstream 2.0kb downstream 2000 false Chr07: 45173618-45175617 Eucalyptus grandis
Eucgr.G02422 5.0kb upstream 5.0kb upstream 8178 true Chr07: 45165440-45173617 Eucalyptus grandis
Eucgr.G02422 5.0kb upstream 5.0kb upstream 5000 false Chr07: 45165440-45170439 Eucalyptus grandis
Eucgr.G02422 5.0kb downstream 5.0kb downstream 8178 true Chr07: 45170440-45178617 Eucalyptus grandis
Eucgr.G02422 5.0kb downstream 5.0kb downstream 5000 false Chr07: 45173618-45178617 Eucalyptus grandis
Eucgr.G02422 10.0kb upstream 10.0kb upstream 13178 true Chr07: 45160440-45173617 Eucalyptus grandis
Eucgr.G02422 10.0kb upstream 10.0kb upstream 10000 false Chr07: 45160440-45170439 Eucalyptus grandis
Eucgr.G02422 10.0kb downstream 10.0kb downstream 13178 true Chr07: 45170440-45183617 Eucalyptus grandis
Eucgr.G02422 10.0kb downstream 10.0kb downstream 10000 false Chr07: 45173618-45183617 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067948 5270 Rosid View MSA
123752005 5271 Pentapetalae View MSA
122788507 5272 Eudicot View MSA
122041771 5273 Angiosperm View MSA
121345786 5274 Embryophyte View MSA
123426526 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.15885 0.0 25.622    
cufflinks 5.26749 0.0 13.6119    
cufflinks 7.09021 0.0 17.4964    
cufflinks 4.13283 0.0 10.9463   Low
cufflinks 12.17 0.0 28.1549   High
cufflinks 10.6889 0.0 25.0892    

0 Strain