Gene : Eucgr.G02238 E. grandis v2.0
Defline:  (1 of 1) PTHR31285:SF0 - PROMOTER OF FILAMENTATION PROTEIN 1 Genomic Order:  1795
Name:  ? Eucgr.G02238 Secondary Identifier:  ? PAC:32072128
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02238 0.5kb upstream 0.5kb upstream 6586 true Chr07: 42523193-42529778 Eucalyptus grandis
Eucgr.G02238 0.5kb upstream 0.5kb upstream 500 false Chr07: 42523193-42523692 Eucalyptus grandis
Eucgr.G02238 0.5kb downstream 0.5kb downstream 6586 true Chr07: 42523693-42530278 Eucalyptus grandis
Eucgr.G02238 0.5kb downstream 0.5kb downstream 500 false Chr07: 42529779-42530278 Eucalyptus grandis
Eucgr.G02238 1.0kb upstream 1.0kb upstream 7086 true Chr07: 42522693-42529778 Eucalyptus grandis
Eucgr.G02238 1.0kb upstream 1.0kb upstream 1000 false Chr07: 42522693-42523692 Eucalyptus grandis
Eucgr.G02238 1.0kb downstream 1.0kb downstream 7086 true Chr07: 42523693-42530778 Eucalyptus grandis
Eucgr.G02238 1.0kb downstream 1.0kb downstream 1000 false Chr07: 42529779-42530778 Eucalyptus grandis
Eucgr.G02238 2.0kb upstream 2.0kb upstream 8086 true Chr07: 42521693-42529778 Eucalyptus grandis
Eucgr.G02238 2.0kb upstream 2.0kb upstream 2000 false Chr07: 42521693-42523692 Eucalyptus grandis
Eucgr.G02238 2.0kb downstream 2.0kb downstream 8086 true Chr07: 42523693-42531778 Eucalyptus grandis
Eucgr.G02238 2.0kb downstream 2.0kb downstream 2000 false Chr07: 42529779-42531778 Eucalyptus grandis
Eucgr.G02238 5.0kb upstream 5.0kb upstream 11086 true Chr07: 42518693-42529778 Eucalyptus grandis
Eucgr.G02238 5.0kb upstream 5.0kb upstream 5000 false Chr07: 42518693-42523692 Eucalyptus grandis
Eucgr.G02238 5.0kb downstream 5.0kb downstream 11086 true Chr07: 42523693-42534778 Eucalyptus grandis
Eucgr.G02238 5.0kb downstream 5.0kb downstream 5000 false Chr07: 42529779-42534778 Eucalyptus grandis
Eucgr.G02238 10.0kb upstream 10.0kb upstream 16086 true Chr07: 42513693-42529778 Eucalyptus grandis
Eucgr.G02238 10.0kb upstream 10.0kb upstream 10000 false Chr07: 42513693-42523692 Eucalyptus grandis
Eucgr.G02238 10.0kb downstream 10.0kb downstream 16086 true Chr07: 42523693-42539778 Eucalyptus grandis
Eucgr.G02238 10.0kb downstream 10.0kb downstream 10000 false Chr07: 42529779-42539778 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066208 5270 Rosid View MSA
123737916 5271 Pentapetalae View MSA
122789184 5272 Eudicot View MSA
122047029 5273 Angiosperm View MSA
121345024 5274 Embryophyte View MSA
123425109 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.0396 0.0 44.8646    
cufflinks 23.5187 0.0 52.2634   High
cufflinks 15.3295 0.0 34.7118    
cufflinks 22.33 0.0 49.6982    
cufflinks 12.7383 0.0 29.2265   Low
cufflinks 18.1495 0.0 40.9264    

0 Strain