Gene : Eucgr.G02233 E. grandis v2.0
Defline:  (1 of 14) 3.1.3.4 - Phosphatidate phosphatase / Phosphatidic acid phospphatase Genomic Order:  1790
Name:  ? Eucgr.G02233 Secondary Identifier:  ? PAC:32072464
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis TRIGLSYN-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02233 0.5kb upstream 0.5kb upstream 4767 true Chr07: 42463198-42467964 Eucalyptus grandis
Eucgr.G02233 0.5kb upstream 0.5kb upstream 500 false Chr07: 42467465-42467964 Eucalyptus grandis
Eucgr.G02233 0.5kb downstream 0.5kb downstream 4767 true Chr07: 42462698-42467464 Eucalyptus grandis
Eucgr.G02233 0.5kb downstream 0.5kb downstream 500 false Chr07: 42462698-42463197 Eucalyptus grandis
Eucgr.G02233 1.0kb upstream 1.0kb upstream 5267 true Chr07: 42463198-42468464 Eucalyptus grandis
Eucgr.G02233 1.0kb upstream 1.0kb upstream 1000 false Chr07: 42467465-42468464 Eucalyptus grandis
Eucgr.G02233 1.0kb downstream 1.0kb downstream 5267 true Chr07: 42462198-42467464 Eucalyptus grandis
Eucgr.G02233 1.0kb downstream 1.0kb downstream 1000 false Chr07: 42462198-42463197 Eucalyptus grandis
Eucgr.G02233 2.0kb upstream 2.0kb upstream 6267 true Chr07: 42463198-42469464 Eucalyptus grandis
Eucgr.G02233 2.0kb upstream 2.0kb upstream 2000 false Chr07: 42467465-42469464 Eucalyptus grandis
Eucgr.G02233 2.0kb downstream 2.0kb downstream 6267 true Chr07: 42461198-42467464 Eucalyptus grandis
Eucgr.G02233 2.0kb downstream 2.0kb downstream 2000 false Chr07: 42461198-42463197 Eucalyptus grandis
Eucgr.G02233 5.0kb upstream 5.0kb upstream 9267 true Chr07: 42463198-42472464 Eucalyptus grandis
Eucgr.G02233 5.0kb upstream 5.0kb upstream 5000 false Chr07: 42467465-42472464 Eucalyptus grandis
Eucgr.G02233 5.0kb downstream 5.0kb downstream 9267 true Chr07: 42458198-42467464 Eucalyptus grandis
Eucgr.G02233 5.0kb downstream 5.0kb downstream 5000 false Chr07: 42458198-42463197 Eucalyptus grandis
Eucgr.G02233 10.0kb upstream 10.0kb upstream 14267 true Chr07: 42463198-42477464 Eucalyptus grandis
Eucgr.G02233 10.0kb upstream 10.0kb upstream 10000 false Chr07: 42467465-42477464 Eucalyptus grandis
Eucgr.G02233 10.0kb downstream 10.0kb downstream 14267 true Chr07: 42453198-42467464 Eucalyptus grandis
Eucgr.G02233 10.0kb downstream 10.0kb downstream 10000 false Chr07: 42453198-42463197 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074068 5270 Rosid View MSA
123752776 5271 Pentapetalae View MSA
122787523 5272 Eudicot View MSA
122042575 5273 Angiosperm View MSA
121350600 5274 Embryophyte View MSA
123428329 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.273 0.0 46.9749    
cufflinks 28.8107 0.0 77.0394   High
cufflinks 20.9815 0.0 52.6052    
cufflinks 10.9388 0.0 31.5452   Low
cufflinks 22.6356 0.0 61.6852    
cufflinks 23.2501 0.0 63.8674    

0 Strain