Gene : Eucgr.G02967 E. grandis v2.0
Defline:  (1 of 28) KOG1987 - Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains Genomic Order:  2449
Name:  ? Eucgr.G02967 Secondary Identifier:  ? PAC:32073467
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02967 0.5kb upstream 0.5kb upstream 3818 true Chr07: 50807404-50811221 Eucalyptus grandis
Eucgr.G02967 0.5kb upstream 0.5kb upstream 500 false Chr07: 50807404-50807903 Eucalyptus grandis
Eucgr.G02967 0.5kb downstream 0.5kb downstream 3818 true Chr07: 50807904-50811721 Eucalyptus grandis
Eucgr.G02967 0.5kb downstream 0.5kb downstream 500 false Chr07: 50811222-50811721 Eucalyptus grandis
Eucgr.G02967 1.0kb upstream 1.0kb upstream 4318 true Chr07: 50806904-50811221 Eucalyptus grandis
Eucgr.G02967 1.0kb upstream 1.0kb upstream 1000 false Chr07: 50806904-50807903 Eucalyptus grandis
Eucgr.G02967 1.0kb downstream 1.0kb downstream 4318 true Chr07: 50807904-50812221 Eucalyptus grandis
Eucgr.G02967 1.0kb downstream 1.0kb downstream 1000 false Chr07: 50811222-50812221 Eucalyptus grandis
Eucgr.G02967 2.0kb upstream 2.0kb upstream 5318 true Chr07: 50805904-50811221 Eucalyptus grandis
Eucgr.G02967 2.0kb upstream 2.0kb upstream 2000 false Chr07: 50805904-50807903 Eucalyptus grandis
Eucgr.G02967 2.0kb downstream 2.0kb downstream 5318 true Chr07: 50807904-50813221 Eucalyptus grandis
Eucgr.G02967 2.0kb downstream 2.0kb downstream 2000 false Chr07: 50811222-50813221 Eucalyptus grandis
Eucgr.G02967 5.0kb upstream 5.0kb upstream 8318 true Chr07: 50802904-50811221 Eucalyptus grandis
Eucgr.G02967 5.0kb upstream 5.0kb upstream 5000 false Chr07: 50802904-50807903 Eucalyptus grandis
Eucgr.G02967 5.0kb downstream 5.0kb downstream 8318 true Chr07: 50807904-50816221 Eucalyptus grandis
Eucgr.G02967 5.0kb downstream 5.0kb downstream 5000 false Chr07: 50811222-50816221 Eucalyptus grandis
Eucgr.G02967 10.0kb upstream 10.0kb upstream 13318 true Chr07: 50797904-50811221 Eucalyptus grandis
Eucgr.G02967 10.0kb upstream 10.0kb upstream 10000 false Chr07: 50797904-50807903 Eucalyptus grandis
Eucgr.G02967 10.0kb downstream 10.0kb downstream 13318 true Chr07: 50807904-50821221 Eucalyptus grandis
Eucgr.G02967 10.0kb downstream 10.0kb downstream 10000 false Chr07: 50811222-50821221 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067475 5270 Rosid View MSA
123739002 5271 Pentapetalae View MSA
122796766 5272 Eudicot View MSA
122042496 5273 Angiosperm View MSA
121309979 5274 Embryophyte View MSA
123428082 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.2296 0.0 42.9322   Low
cufflinks 34.3884 0.0 84.6804   High
cufflinks 20.6349 0.0 55.0743    
cufflinks 32.3458 0.0 79.527    
cufflinks 30.5765 0.0 73.2006    
cufflinks 21.0004 0.0 47.2587    

0 Strain