Gene : Eucgr.G02948 E. grandis v2.0
Defline:  (1 of 2) PTHR22763//PTHR22763:SF26 - RING ZINC FINGER PROTEIN Genomic Order:  2433
Name:  ? Eucgr.G02948 Secondary Identifier:  ? PAC:32073227
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-7511 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02948 0.5kb upstream 0.5kb upstream 2796 true Chr07: 50665496-50668291 Eucalyptus grandis
Eucgr.G02948 0.5kb upstream 0.5kb upstream 500 false Chr07: 50667792-50668291 Eucalyptus grandis
Eucgr.G02948 0.5kb downstream 0.5kb downstream 2796 true Chr07: 50664996-50667791 Eucalyptus grandis
Eucgr.G02948 0.5kb downstream 0.5kb downstream 500 false Chr07: 50664996-50665495 Eucalyptus grandis
Eucgr.G02948 1.0kb upstream 1.0kb upstream 3296 true Chr07: 50665496-50668791 Eucalyptus grandis
Eucgr.G02948 1.0kb upstream 1.0kb upstream 1000 false Chr07: 50667792-50668791 Eucalyptus grandis
Eucgr.G02948 1.0kb downstream 1.0kb downstream 3296 true Chr07: 50664496-50667791 Eucalyptus grandis
Eucgr.G02948 1.0kb downstream 1.0kb downstream 1000 false Chr07: 50664496-50665495 Eucalyptus grandis
Eucgr.G02948 2.0kb upstream 2.0kb upstream 4296 true Chr07: 50665496-50669791 Eucalyptus grandis
Eucgr.G02948 2.0kb upstream 2.0kb upstream 2000 false Chr07: 50667792-50669791 Eucalyptus grandis
Eucgr.G02948 2.0kb downstream 2.0kb downstream 4296 true Chr07: 50663496-50667791 Eucalyptus grandis
Eucgr.G02948 2.0kb downstream 2.0kb downstream 2000 false Chr07: 50663496-50665495 Eucalyptus grandis
Eucgr.G02948 5.0kb upstream 5.0kb upstream 7296 true Chr07: 50665496-50672791 Eucalyptus grandis
Eucgr.G02948 5.0kb upstream 5.0kb upstream 5000 false Chr07: 50667792-50672791 Eucalyptus grandis
Eucgr.G02948 5.0kb downstream 5.0kb downstream 7296 true Chr07: 50660496-50667791 Eucalyptus grandis
Eucgr.G02948 5.0kb downstream 5.0kb downstream 5000 false Chr07: 50660496-50665495 Eucalyptus grandis
Eucgr.G02948 10.0kb upstream 10.0kb upstream 12296 true Chr07: 50665496-50677791 Eucalyptus grandis
Eucgr.G02948 10.0kb upstream 10.0kb upstream 10000 false Chr07: 50667792-50677791 Eucalyptus grandis
Eucgr.G02948 10.0kb downstream 10.0kb downstream 12296 true Chr07: 50655496-50667791 Eucalyptus grandis
Eucgr.G02948 10.0kb downstream 10.0kb downstream 10000 false Chr07: 50655496-50665495 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073026 5270 Rosid View MSA
123745848 5271 Pentapetalae View MSA
122795555 5272 Eudicot View MSA
122050385 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 67.4247 0.0 151.713 High  
cufflinks 88.3613 0.0 201.909 High  
cufflinks 56.3036 0.0 125.626 High  
cufflinks 101.89 0.0 234.939 High  
cufflinks 111.957 0.0 259.516 High High
cufflinks 51.5949 0.0 114.973 High Low

0 Strain