Gene : Eucgr.G02939 E. grandis v2.0
Defline:  (1 of 85) PF03514 - GRAS domain family (GRAS) Genomic Order:  2425
Name:  ? Eucgr.G02939 Secondary Identifier:  ? PAC:32070597
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02939 0.5kb upstream 0.5kb upstream 3705 true Chr07: 50587534-50591238 Eucalyptus grandis
Eucgr.G02939 0.5kb upstream 0.5kb upstream 500 false Chr07: 50587534-50588033 Eucalyptus grandis
Eucgr.G02939 0.5kb downstream 0.5kb downstream 3705 true Chr07: 50588034-50591738 Eucalyptus grandis
Eucgr.G02939 0.5kb downstream 0.5kb downstream 500 false Chr07: 50591239-50591738 Eucalyptus grandis
Eucgr.G02939 1.0kb upstream 1.0kb upstream 4205 true Chr07: 50587034-50591238 Eucalyptus grandis
Eucgr.G02939 1.0kb upstream 1.0kb upstream 1000 false Chr07: 50587034-50588033 Eucalyptus grandis
Eucgr.G02939 1.0kb downstream 1.0kb downstream 4205 true Chr07: 50588034-50592238 Eucalyptus grandis
Eucgr.G02939 1.0kb downstream 1.0kb downstream 1000 false Chr07: 50591239-50592238 Eucalyptus grandis
Eucgr.G02939 2.0kb upstream 2.0kb upstream 5205 true Chr07: 50586034-50591238 Eucalyptus grandis
Eucgr.G02939 2.0kb upstream 2.0kb upstream 2000 false Chr07: 50586034-50588033 Eucalyptus grandis
Eucgr.G02939 2.0kb downstream 2.0kb downstream 5205 true Chr07: 50588034-50593238 Eucalyptus grandis
Eucgr.G02939 2.0kb downstream 2.0kb downstream 2000 false Chr07: 50591239-50593238 Eucalyptus grandis
Eucgr.G02939 5.0kb upstream 5.0kb upstream 8205 true Chr07: 50583034-50591238 Eucalyptus grandis
Eucgr.G02939 5.0kb upstream 5.0kb upstream 5000 false Chr07: 50583034-50588033 Eucalyptus grandis
Eucgr.G02939 5.0kb downstream 5.0kb downstream 8205 true Chr07: 50588034-50596238 Eucalyptus grandis
Eucgr.G02939 5.0kb downstream 5.0kb downstream 5000 false Chr07: 50591239-50596238 Eucalyptus grandis
Eucgr.G02939 10.0kb upstream 10.0kb upstream 13205 true Chr07: 50578034-50591238 Eucalyptus grandis
Eucgr.G02939 10.0kb upstream 10.0kb upstream 10000 false Chr07: 50578034-50588033 Eucalyptus grandis
Eucgr.G02939 10.0kb downstream 10.0kb downstream 13205 true Chr07: 50588034-50601238 Eucalyptus grandis
Eucgr.G02939 10.0kb downstream 10.0kb downstream 10000 false Chr07: 50591239-50601238 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071892 5270 Rosid View MSA
123750613 5271 Pentapetalae View MSA
122790030 5272 Eudicot View MSA
122048011 5273 Angiosperm View MSA
121350999 5274 Embryophyte View MSA
123381964 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.42535 0.0 8.19263   Low
cufflinks 4.87614 0.0 11.2485    
cufflinks 4.83593 0.0 11.1841    
cufflinks 9.80046 0.0 21.7916   High
cufflinks 9.61736 0.0 21.4193   High
cufflinks 4.17306 0.0 9.83744    

0 Strain