Gene : Eucgr.G02896 E. grandis v2.0
Defline:  (1 of 1) KOG2499 - Beta-N-acetylhexosaminidase Genomic Order:  2391
Name:  ? Eucgr.G02896 Secondary Identifier:  ? PAC:32073235
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6902 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02896 0.5kb upstream 0.5kb upstream 6412 true Chr07: 49958468-49964879 Eucalyptus grandis
Eucgr.G02896 0.5kb upstream 0.5kb upstream 500 false Chr07: 49958468-49958967 Eucalyptus grandis
Eucgr.G02896 0.5kb downstream 0.5kb downstream 6412 true Chr07: 49958968-49965379 Eucalyptus grandis
Eucgr.G02896 0.5kb downstream 0.5kb downstream 500 false Chr07: 49964880-49965379 Eucalyptus grandis
Eucgr.G02896 1.0kb upstream 1.0kb upstream 6912 true Chr07: 49957968-49964879 Eucalyptus grandis
Eucgr.G02896 1.0kb upstream 1.0kb upstream 1000 false Chr07: 49957968-49958967 Eucalyptus grandis
Eucgr.G02896 1.0kb downstream 1.0kb downstream 6912 true Chr07: 49958968-49965879 Eucalyptus grandis
Eucgr.G02896 1.0kb downstream 1.0kb downstream 1000 false Chr07: 49964880-49965879 Eucalyptus grandis
Eucgr.G02896 2.0kb upstream 2.0kb upstream 7912 true Chr07: 49956968-49964879 Eucalyptus grandis
Eucgr.G02896 2.0kb upstream 2.0kb upstream 2000 false Chr07: 49956968-49958967 Eucalyptus grandis
Eucgr.G02896 2.0kb downstream 2.0kb downstream 7912 true Chr07: 49958968-49966879 Eucalyptus grandis
Eucgr.G02896 2.0kb downstream 2.0kb downstream 2000 false Chr07: 49964880-49966879 Eucalyptus grandis
Eucgr.G02896 5.0kb upstream 5.0kb upstream 10912 true Chr07: 49953968-49964879 Eucalyptus grandis
Eucgr.G02896 5.0kb upstream 5.0kb upstream 5000 false Chr07: 49953968-49958967 Eucalyptus grandis
Eucgr.G02896 5.0kb downstream 5.0kb downstream 10912 true Chr07: 49958968-49969879 Eucalyptus grandis
Eucgr.G02896 5.0kb downstream 5.0kb downstream 5000 false Chr07: 49964880-49969879 Eucalyptus grandis
Eucgr.G02896 10.0kb upstream 10.0kb upstream 15912 true Chr07: 49948968-49964879 Eucalyptus grandis
Eucgr.G02896 10.0kb upstream 10.0kb upstream 10000 false Chr07: 49948968-49958967 Eucalyptus grandis
Eucgr.G02896 10.0kb downstream 10.0kb downstream 15912 true Chr07: 49958968-49974879 Eucalyptus grandis
Eucgr.G02896 10.0kb downstream 10.0kb downstream 10000 false Chr07: 49964880-49974879 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068580 5270 Rosid View MSA
123738133 5271 Pentapetalae View MSA
122790534 5272 Eudicot View MSA
122047167 5273 Angiosperm View MSA
121346826 5274 Embryophyte View MSA
123428053 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 81.8023 0.0 185.622 High  
cufflinks 63.6684 0.0 143.377 High  
cufflinks 48.3276 0.0 107.501 High  
cufflinks 47.9291 0.0 106.758 High  
cufflinks 30.074 0.0 66.509   Low
cufflinks 109.692 0.0 252.538 High High

0 Strain