Gene : Eucgr.G02842 E. grandis v2.0
Defline:  (1 of 1) PTHR12136//PTHR12136:SF56 - STEROIDOGENIC ACUTE REGULATORY PROTEIN STAR Genomic Order:  2301
Name:  ? Eucgr.G02842 Secondary Identifier:  ? PAC:32071379
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02842 0.5kb upstream 0.5kb upstream 10107 true Chr07: 48661118-48671224 Eucalyptus grandis
Eucgr.G02842 0.5kb upstream 0.5kb upstream 500 false Chr07: 48661118-48661617 Eucalyptus grandis
Eucgr.G02842 0.5kb downstream 0.5kb downstream 10107 true Chr07: 48661618-48671724 Eucalyptus grandis
Eucgr.G02842 0.5kb downstream 0.5kb downstream 500 false Chr07: 48671225-48671724 Eucalyptus grandis
Eucgr.G02842 1.0kb upstream 1.0kb upstream 10607 true Chr07: 48660618-48671224 Eucalyptus grandis
Eucgr.G02842 1.0kb upstream 1.0kb upstream 1000 false Chr07: 48660618-48661617 Eucalyptus grandis
Eucgr.G02842 1.0kb downstream 1.0kb downstream 10607 true Chr07: 48661618-48672224 Eucalyptus grandis
Eucgr.G02842 1.0kb downstream 1.0kb downstream 1000 false Chr07: 48671225-48672224 Eucalyptus grandis
Eucgr.G02842 2.0kb upstream 2.0kb upstream 11607 true Chr07: 48659618-48671224 Eucalyptus grandis
Eucgr.G02842 2.0kb upstream 2.0kb upstream 2000 false Chr07: 48659618-48661617 Eucalyptus grandis
Eucgr.G02842 2.0kb downstream 2.0kb downstream 11607 true Chr07: 48661618-48673224 Eucalyptus grandis
Eucgr.G02842 2.0kb downstream 2.0kb downstream 2000 false Chr07: 48671225-48673224 Eucalyptus grandis
Eucgr.G02842 5.0kb upstream 5.0kb upstream 14607 true Chr07: 48656618-48671224 Eucalyptus grandis
Eucgr.G02842 5.0kb upstream 5.0kb upstream 5000 false Chr07: 48656618-48661617 Eucalyptus grandis
Eucgr.G02842 5.0kb downstream 5.0kb downstream 14607 true Chr07: 48661618-48676224 Eucalyptus grandis
Eucgr.G02842 5.0kb downstream 5.0kb downstream 5000 false Chr07: 48671225-48676224 Eucalyptus grandis
Eucgr.G02842 10.0kb upstream 10.0kb upstream 19607 true Chr07: 48651618-48671224 Eucalyptus grandis
Eucgr.G02842 10.0kb upstream 10.0kb upstream 10000 false Chr07: 48651618-48661617 Eucalyptus grandis
Eucgr.G02842 10.0kb downstream 10.0kb downstream 19607 true Chr07: 48661618-48681224 Eucalyptus grandis
Eucgr.G02842 10.0kb downstream 10.0kb downstream 10000 false Chr07: 48671225-48681224 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064744 5270 Rosid View MSA
123746336 5271 Pentapetalae View MSA
122790563 5272 Eudicot View MSA
122046452 5273 Angiosperm View MSA
121347989 5274 Embryophyte View MSA
123428121 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.233657 0.0 0.754159 Low  
cufflinks 1.3741 0.0 3.6309    
cufflinks 0.11039 0.0 0.392009 Low Low
cufflinks 2.71594 0.0 6.67722   High
cufflinks 0.942924 0.0 2.58573    
cufflinks 0.245497 0.0 0.789536 Low  

0 Strain