Gene : Eucgr.G02851 E. grandis v2.0
Defline:  (1 of 7) PTHR10362//PTHR10362:SF19 - HISTIDINE AMMONIA-LYASE Genomic Order:  2293
Name:  ? Eucgr.G02851 Secondary Identifier:  ? PAC:32072291
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-1121 Eucalyptus grandis pathologic  
Egrandis PWY1F-467 Eucalyptus grandis pathologic  
Egrandis PWY-7186 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02851 0.5kb upstream 0.5kb upstream 3300 true Chr07: 48551426-48554725 Eucalyptus grandis
Eucgr.G02851 0.5kb upstream 0.5kb upstream 500 false Chr07: 48554226-48554725 Eucalyptus grandis
Eucgr.G02851 0.5kb downstream 0.5kb downstream 3300 true Chr07: 48550926-48554225 Eucalyptus grandis
Eucgr.G02851 0.5kb downstream 0.5kb downstream 500 false Chr07: 48550926-48551425 Eucalyptus grandis
Eucgr.G02851 1.0kb upstream 1.0kb upstream 3800 true Chr07: 48551426-48555225 Eucalyptus grandis
Eucgr.G02851 1.0kb upstream 1.0kb upstream 1000 false Chr07: 48554226-48555225 Eucalyptus grandis
Eucgr.G02851 1.0kb downstream 1.0kb downstream 3800 true Chr07: 48550426-48554225 Eucalyptus grandis
Eucgr.G02851 1.0kb downstream 1.0kb downstream 1000 false Chr07: 48550426-48551425 Eucalyptus grandis
Eucgr.G02851 2.0kb upstream 2.0kb upstream 4800 true Chr07: 48551426-48556225 Eucalyptus grandis
Eucgr.G02851 2.0kb upstream 2.0kb upstream 2000 false Chr07: 48554226-48556225 Eucalyptus grandis
Eucgr.G02851 2.0kb downstream 2.0kb downstream 4800 true Chr07: 48549426-48554225 Eucalyptus grandis
Eucgr.G02851 2.0kb downstream 2.0kb downstream 2000 false Chr07: 48549426-48551425 Eucalyptus grandis
Eucgr.G02851 5.0kb upstream 5.0kb upstream 7800 true Chr07: 48551426-48559225 Eucalyptus grandis
Eucgr.G02851 5.0kb upstream 5.0kb upstream 5000 false Chr07: 48554226-48559225 Eucalyptus grandis
Eucgr.G02851 5.0kb downstream 5.0kb downstream 7800 true Chr07: 48546426-48554225 Eucalyptus grandis
Eucgr.G02851 5.0kb downstream 5.0kb downstream 5000 false Chr07: 48546426-48551425 Eucalyptus grandis
Eucgr.G02851 10.0kb upstream 10.0kb upstream 12800 true Chr07: 48551426-48564225 Eucalyptus grandis
Eucgr.G02851 10.0kb upstream 10.0kb upstream 10000 false Chr07: 48554226-48564225 Eucalyptus grandis
Eucgr.G02851 10.0kb downstream 10.0kb downstream 12800 true Chr07: 48541426-48554225 Eucalyptus grandis
Eucgr.G02851 10.0kb downstream 10.0kb downstream 10000 false Chr07: 48541426-48551425 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070450 5270 Rosid View MSA
123747775 5271 Pentapetalae View MSA
122795347 5272 Eudicot View MSA
122043246 5273 Angiosperm View MSA
121351477 5274 Embryophyte View MSA
123382181 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0617222 0.0 0.25519 Low Low
cufflinks 11.9722 0.0 26.9779   High
cufflinks 0.393461 0.0 1.24149    
cufflinks 7.3913 0.0 17.2809   High
cufflinks 0.748548 0.0 2.17702 Low  
cufflinks 0.587422 0.0 1.72642 Low  

0 Strain