Gene : Eucgr.G02800 E. grandis v2.0
Defline:  (1 of 9) PF05347 - Complex 1 protein (LYR family) (Complex1_LYR) Genomic Order:  2341
Name:  ? Eucgr.G02800 Secondary Identifier:  ? PAC:32070338
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02800 0.5kb upstream 0.5kb upstream 3087 true Chr07: 49120451-49123537 Eucalyptus grandis
Eucgr.G02800 0.5kb upstream 0.5kb upstream 500 false Chr07: 49120451-49120950 Eucalyptus grandis
Eucgr.G02800 0.5kb downstream 0.5kb downstream 3087 true Chr07: 49120951-49124037 Eucalyptus grandis
Eucgr.G02800 0.5kb downstream 0.5kb downstream 500 false Chr07: 49123538-49124037 Eucalyptus grandis
Eucgr.G02800 1.0kb upstream 1.0kb upstream 3587 true Chr07: 49119951-49123537 Eucalyptus grandis
Eucgr.G02800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 49119951-49120950 Eucalyptus grandis
Eucgr.G02800 1.0kb downstream 1.0kb downstream 3587 true Chr07: 49120951-49124537 Eucalyptus grandis
Eucgr.G02800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 49123538-49124537 Eucalyptus grandis
Eucgr.G02800 2.0kb upstream 2.0kb upstream 4587 true Chr07: 49118951-49123537 Eucalyptus grandis
Eucgr.G02800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 49118951-49120950 Eucalyptus grandis
Eucgr.G02800 2.0kb downstream 2.0kb downstream 4587 true Chr07: 49120951-49125537 Eucalyptus grandis
Eucgr.G02800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 49123538-49125537 Eucalyptus grandis
Eucgr.G02800 5.0kb upstream 5.0kb upstream 7587 true Chr07: 49115951-49123537 Eucalyptus grandis
Eucgr.G02800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 49115951-49120950 Eucalyptus grandis
Eucgr.G02800 5.0kb downstream 5.0kb downstream 7587 true Chr07: 49120951-49128537 Eucalyptus grandis
Eucgr.G02800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 49123538-49128537 Eucalyptus grandis
Eucgr.G02800 10.0kb upstream 10.0kb upstream 12587 true Chr07: 49110951-49123537 Eucalyptus grandis
Eucgr.G02800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 49110951-49120950 Eucalyptus grandis
Eucgr.G02800 10.0kb downstream 10.0kb downstream 12587 true Chr07: 49120951-49133537 Eucalyptus grandis
Eucgr.G02800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 49123538-49133537 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063359 5270 Rosid View MSA
123753617 5271 Pentapetalae View MSA
122788417 5272 Eudicot View MSA
122042390 5273 Angiosperm View MSA
121351633 5274 Embryophyte View MSA
123426034 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.30137 0.0 11.6705   Low
cufflinks 5.46118 0.0 14.4305    
cufflinks 5.91506 0.0 15.5669    
cufflinks 6.41729 0.0 16.6849    
cufflinks 9.35642 0.0 23.4347   High
cufflinks 6.0142 0.0 15.8794    

0 Strain