Gene : Eucgr.G02689 E. grandis v2.0
Defline:  (1 of 1) PTHR10954 - RIBONUCLEASE H2 SUBUNIT A Genomic Order:  2192
Name:  ? Eucgr.G02689 Secondary Identifier:  ? PAC:32070684
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02689 0.5kb upstream 0.5kb upstream 5568 true Chr07: 47321511-47327078 Eucalyptus grandis
Eucgr.G02689 0.5kb upstream 0.5kb upstream 500 false Chr07: 47321511-47322010 Eucalyptus grandis
Eucgr.G02689 0.5kb downstream 0.5kb downstream 5568 true Chr07: 47322011-47327578 Eucalyptus grandis
Eucgr.G02689 0.5kb downstream 0.5kb downstream 500 false Chr07: 47327079-47327578 Eucalyptus grandis
Eucgr.G02689 1.0kb upstream 1.0kb upstream 6068 true Chr07: 47321011-47327078 Eucalyptus grandis
Eucgr.G02689 1.0kb upstream 1.0kb upstream 1000 false Chr07: 47321011-47322010 Eucalyptus grandis
Eucgr.G02689 1.0kb downstream 1.0kb downstream 6068 true Chr07: 47322011-47328078 Eucalyptus grandis
Eucgr.G02689 1.0kb downstream 1.0kb downstream 1000 false Chr07: 47327079-47328078 Eucalyptus grandis
Eucgr.G02689 2.0kb upstream 2.0kb upstream 7068 true Chr07: 47320011-47327078 Eucalyptus grandis
Eucgr.G02689 2.0kb upstream 2.0kb upstream 2000 false Chr07: 47320011-47322010 Eucalyptus grandis
Eucgr.G02689 2.0kb downstream 2.0kb downstream 7068 true Chr07: 47322011-47329078 Eucalyptus grandis
Eucgr.G02689 2.0kb downstream 2.0kb downstream 2000 false Chr07: 47327079-47329078 Eucalyptus grandis
Eucgr.G02689 5.0kb upstream 5.0kb upstream 10068 true Chr07: 47317011-47327078 Eucalyptus grandis
Eucgr.G02689 5.0kb upstream 5.0kb upstream 5000 false Chr07: 47317011-47322010 Eucalyptus grandis
Eucgr.G02689 5.0kb downstream 5.0kb downstream 10068 true Chr07: 47322011-47332078 Eucalyptus grandis
Eucgr.G02689 5.0kb downstream 5.0kb downstream 5000 false Chr07: 47327079-47332078 Eucalyptus grandis
Eucgr.G02689 10.0kb upstream 10.0kb upstream 15068 true Chr07: 47312011-47327078 Eucalyptus grandis
Eucgr.G02689 10.0kb upstream 10.0kb upstream 10000 false Chr07: 47312011-47322010 Eucalyptus grandis
Eucgr.G02689 10.0kb downstream 10.0kb downstream 15068 true Chr07: 47322011-47337078 Eucalyptus grandis
Eucgr.G02689 10.0kb downstream 10.0kb downstream 10000 false Chr07: 47327079-47337078 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124049228 5270 Rosid Singleton cluster - no MSA
123745716 5271 Pentapetalae View MSA
122794048 5272 Eudicot View MSA
122048331 5273 Angiosperm View MSA
121344250 5274 Embryophyte View MSA
123427271 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.68541 0.0 20.6258    
cufflinks 3.60965 0.0 9.3504    
cufflinks 5.68217 0.0 15.7156    
cufflinks 2.22223 0.0 7.40501   Low
cufflinks 8.91229 0.0 20.5751   High
cufflinks 4.18839 0.0 10.5583    

0 Strain