Gene : Eucgr.G02661 E. grandis v2.0
Defline:  (1 of 5) 1.3.1.22 - 3-oxo-5-alpha-steroid 4-dehydrogenase (NADP(+)) / Cholestenone 5-alpha-reductase Genomic Order:  2170
Name:  ? Eucgr.G02661 Secondary Identifier:  ? PAC:32073368
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02661 0.5kb upstream 0.5kb upstream 1931 true Chr07: 47169352-47171282 Eucalyptus grandis
Eucgr.G02661 0.5kb upstream 0.5kb upstream 500 false Chr07: 47170783-47171282 Eucalyptus grandis
Eucgr.G02661 0.5kb downstream 0.5kb downstream 1931 true Chr07: 47168852-47170782 Eucalyptus grandis
Eucgr.G02661 0.5kb downstream 0.5kb downstream 500 false Chr07: 47168852-47169351 Eucalyptus grandis
Eucgr.G02661 1.0kb upstream 1.0kb upstream 2431 true Chr07: 47169352-47171782 Eucalyptus grandis
Eucgr.G02661 1.0kb upstream 1.0kb upstream 1000 false Chr07: 47170783-47171782 Eucalyptus grandis
Eucgr.G02661 1.0kb downstream 1.0kb downstream 2431 true Chr07: 47168352-47170782 Eucalyptus grandis
Eucgr.G02661 1.0kb downstream 1.0kb downstream 1000 false Chr07: 47168352-47169351 Eucalyptus grandis
Eucgr.G02661 2.0kb upstream 2.0kb upstream 3431 true Chr07: 47169352-47172782 Eucalyptus grandis
Eucgr.G02661 2.0kb upstream 2.0kb upstream 2000 false Chr07: 47170783-47172782 Eucalyptus grandis
Eucgr.G02661 2.0kb downstream 2.0kb downstream 3431 true Chr07: 47167352-47170782 Eucalyptus grandis
Eucgr.G02661 2.0kb downstream 2.0kb downstream 2000 false Chr07: 47167352-47169351 Eucalyptus grandis
Eucgr.G02661 5.0kb upstream 5.0kb upstream 6431 true Chr07: 47169352-47175782 Eucalyptus grandis
Eucgr.G02661 5.0kb upstream 5.0kb upstream 5000 false Chr07: 47170783-47175782 Eucalyptus grandis
Eucgr.G02661 5.0kb downstream 5.0kb downstream 6431 true Chr07: 47164352-47170782 Eucalyptus grandis
Eucgr.G02661 5.0kb downstream 5.0kb downstream 5000 false Chr07: 47164352-47169351 Eucalyptus grandis
Eucgr.G02661 10.0kb upstream 10.0kb upstream 11431 true Chr07: 47169352-47180782 Eucalyptus grandis
Eucgr.G02661 10.0kb upstream 10.0kb upstream 10000 false Chr07: 47170783-47180782 Eucalyptus grandis
Eucgr.G02661 10.0kb downstream 10.0kb downstream 11431 true Chr07: 47159352-47170782 Eucalyptus grandis
Eucgr.G02661 10.0kb downstream 10.0kb downstream 10000 false Chr07: 47159352-47169351 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060747 5270 Rosid View MSA
123751267 5271 Pentapetalae View MSA
122793833 5272 Eudicot View MSA
122045974 5273 Angiosperm View MSA
121350714 5274 Embryophyte View MSA
123428210 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.2867 0.0 43.0107    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 26.6166 0.0 60.8598 High  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.71659 0.0 15.0936   Low

0 Strain