Gene : Eucgr.G03341 E. grandis v2.0
Defline:  (1 of 17) PTHR10366//PTHR10366:SF332 - NAD DEPENDENT EPIMERASE/DEHYDRATASE Genomic Order:  2782
Name:  ? Eucgr.G03341 Secondary Identifier:  ? PAC:32070386
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G03341 0.5kb upstream 0.5kb upstream 3273 true Chr07: 54136839-54140111 Eucalyptus grandis
Eucgr.G03341 0.5kb upstream 0.5kb upstream 500 false Chr07: 54136839-54137338 Eucalyptus grandis
Eucgr.G03341 0.5kb downstream 0.5kb downstream 3273 true Chr07: 54137339-54140611 Eucalyptus grandis
Eucgr.G03341 0.5kb downstream 0.5kb downstream 500 false Chr07: 54140112-54140611 Eucalyptus grandis
Eucgr.G03341 1.0kb upstream 1.0kb upstream 3773 true Chr07: 54136339-54140111 Eucalyptus grandis
Eucgr.G03341 1.0kb upstream 1.0kb upstream 1000 false Chr07: 54136339-54137338 Eucalyptus grandis
Eucgr.G03341 1.0kb downstream 1.0kb downstream 3773 true Chr07: 54137339-54141111 Eucalyptus grandis
Eucgr.G03341 1.0kb downstream 1.0kb downstream 1000 false Chr07: 54140112-54141111 Eucalyptus grandis
Eucgr.G03341 2.0kb upstream 2.0kb upstream 4773 true Chr07: 54135339-54140111 Eucalyptus grandis
Eucgr.G03341 2.0kb upstream 2.0kb upstream 2000 false Chr07: 54135339-54137338 Eucalyptus grandis
Eucgr.G03341 2.0kb downstream 2.0kb downstream 4773 true Chr07: 54137339-54142111 Eucalyptus grandis
Eucgr.G03341 2.0kb downstream 2.0kb downstream 2000 false Chr07: 54140112-54142111 Eucalyptus grandis
Eucgr.G03341 5.0kb upstream 5.0kb upstream 7773 true Chr07: 54132339-54140111 Eucalyptus grandis
Eucgr.G03341 5.0kb upstream 5.0kb upstream 5000 false Chr07: 54132339-54137338 Eucalyptus grandis
Eucgr.G03341 5.0kb downstream 5.0kb downstream 7773 true Chr07: 54137339-54145111 Eucalyptus grandis
Eucgr.G03341 5.0kb downstream 5.0kb downstream 5000 false Chr07: 54140112-54145111 Eucalyptus grandis
Eucgr.G03341 10.0kb upstream 10.0kb upstream 12773 true Chr07: 54127339-54140111 Eucalyptus grandis
Eucgr.G03341 10.0kb upstream 10.0kb upstream 10000 false Chr07: 54127339-54137338 Eucalyptus grandis
Eucgr.G03341 10.0kb downstream 10.0kb downstream 12773 true Chr07: 54137339-54150111 Eucalyptus grandis
Eucgr.G03341 10.0kb downstream 10.0kb downstream 10000 false Chr07: 54140112-54150111 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072658 5270 Rosid View MSA
123749871 5271 Pentapetalae View MSA
122798457 5272 Eudicot View MSA
122050735 5273 Angiosperm View MSA
121350507 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.213387 0.0 0.797911 Low Low
cufflinks 5.43009 0.0 13.7869   High
cufflinks 1.11087 0.0 3.33459    
cufflinks 1.70974 0.0 4.87869    
cufflinks 0.861471 0.0 2.66458    
cufflinks 2.08546 0.0 5.90134    

0 Strain