Gene : Eucgr.G03334 E. grandis v2.0
Defline:  (1 of 1) PTHR19306:SF1 - STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 Genomic Order:  2776
Name:  ? Eucgr.G03334 Secondary Identifier:  ? PAC:32072732
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G03334 0.5kb upstream 0.5kb upstream 18013 true Chr07: 54070549-54088561 Eucalyptus grandis
Eucgr.G03334 0.5kb upstream 0.5kb upstream 500 false Chr07: 54088062-54088561 Eucalyptus grandis
Eucgr.G03334 0.5kb downstream 0.5kb downstream 18013 true Chr07: 54070049-54088061 Eucalyptus grandis
Eucgr.G03334 0.5kb downstream 0.5kb downstream 500 false Chr07: 54070049-54070548 Eucalyptus grandis
Eucgr.G03334 1.0kb upstream 1.0kb upstream 18513 true Chr07: 54070549-54089061 Eucalyptus grandis
Eucgr.G03334 1.0kb upstream 1.0kb upstream 1000 false Chr07: 54088062-54089061 Eucalyptus grandis
Eucgr.G03334 1.0kb downstream 1.0kb downstream 18513 true Chr07: 54069549-54088061 Eucalyptus grandis
Eucgr.G03334 1.0kb downstream 1.0kb downstream 1000 false Chr07: 54069549-54070548 Eucalyptus grandis
Eucgr.G03334 2.0kb upstream 2.0kb upstream 19513 true Chr07: 54070549-54090061 Eucalyptus grandis
Eucgr.G03334 2.0kb upstream 2.0kb upstream 2000 false Chr07: 54088062-54090061 Eucalyptus grandis
Eucgr.G03334 2.0kb downstream 2.0kb downstream 19513 true Chr07: 54068549-54088061 Eucalyptus grandis
Eucgr.G03334 2.0kb downstream 2.0kb downstream 2000 false Chr07: 54068549-54070548 Eucalyptus grandis
Eucgr.G03334 5.0kb upstream 5.0kb upstream 22513 true Chr07: 54070549-54093061 Eucalyptus grandis
Eucgr.G03334 5.0kb upstream 5.0kb upstream 5000 false Chr07: 54088062-54093061 Eucalyptus grandis
Eucgr.G03334 5.0kb downstream 5.0kb downstream 22513 true Chr07: 54065549-54088061 Eucalyptus grandis
Eucgr.G03334 5.0kb downstream 5.0kb downstream 5000 false Chr07: 54065549-54070548 Eucalyptus grandis
Eucgr.G03334 10.0kb upstream 10.0kb upstream 27513 true Chr07: 54070549-54098061 Eucalyptus grandis
Eucgr.G03334 10.0kb upstream 10.0kb upstream 10000 false Chr07: 54088062-54098061 Eucalyptus grandis
Eucgr.G03334 10.0kb downstream 10.0kb downstream 27513 true Chr07: 54060549-54088061 Eucalyptus grandis
Eucgr.G03334 10.0kb downstream 10.0kb downstream 10000 false Chr07: 54060549-54070548 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065348 5270 Rosid View MSA
123736538 5271 Pentapetalae View MSA
122789208 5272 Eudicot View MSA
122042538 5273 Angiosperm View MSA
121345004 5274 Embryophyte View MSA
123424617 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.16382 0.0 18.139    
cufflinks 3.77877 0.0 8.68744    
cufflinks 8.46048 0.0 18.7609   High
cufflinks 3.6676 0.0 8.43387    
cufflinks 6.84912 0.0 15.2815    
cufflinks 3.02108 0.0 7.15533   Low

0 Strain