Gene : Eucgr.G03333 E. grandis v2.0
Defline:  (1 of 1) PTHR23105:SF5 - 39S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL Genomic Order:  2775
Name:  ? Eucgr.G03333 Secondary Identifier:  ? PAC:32071913
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G03333 0.5kb upstream 0.5kb upstream 4739 true Chr07: 54064418-54069156 Eucalyptus grandis
Eucgr.G03333 0.5kb upstream 0.5kb upstream 500 false Chr07: 54064418-54064917 Eucalyptus grandis
Eucgr.G03333 0.5kb downstream 0.5kb downstream 4739 true Chr07: 54064918-54069656 Eucalyptus grandis
Eucgr.G03333 0.5kb downstream 0.5kb downstream 500 false Chr07: 54069157-54069656 Eucalyptus grandis
Eucgr.G03333 1.0kb upstream 1.0kb upstream 5239 true Chr07: 54063918-54069156 Eucalyptus grandis
Eucgr.G03333 1.0kb upstream 1.0kb upstream 1000 false Chr07: 54063918-54064917 Eucalyptus grandis
Eucgr.G03333 1.0kb downstream 1.0kb downstream 5239 true Chr07: 54064918-54070156 Eucalyptus grandis
Eucgr.G03333 1.0kb downstream 1.0kb downstream 1000 false Chr07: 54069157-54070156 Eucalyptus grandis
Eucgr.G03333 2.0kb upstream 2.0kb upstream 6239 true Chr07: 54062918-54069156 Eucalyptus grandis
Eucgr.G03333 2.0kb upstream 2.0kb upstream 2000 false Chr07: 54062918-54064917 Eucalyptus grandis
Eucgr.G03333 2.0kb downstream 2.0kb downstream 6239 true Chr07: 54064918-54071156 Eucalyptus grandis
Eucgr.G03333 2.0kb downstream 2.0kb downstream 2000 false Chr07: 54069157-54071156 Eucalyptus grandis
Eucgr.G03333 5.0kb upstream 5.0kb upstream 9239 true Chr07: 54059918-54069156 Eucalyptus grandis
Eucgr.G03333 5.0kb upstream 5.0kb upstream 5000 false Chr07: 54059918-54064917 Eucalyptus grandis
Eucgr.G03333 5.0kb downstream 5.0kb downstream 9239 true Chr07: 54064918-54074156 Eucalyptus grandis
Eucgr.G03333 5.0kb downstream 5.0kb downstream 5000 false Chr07: 54069157-54074156 Eucalyptus grandis
Eucgr.G03333 10.0kb upstream 10.0kb upstream 14239 true Chr07: 54054918-54069156 Eucalyptus grandis
Eucgr.G03333 10.0kb upstream 10.0kb upstream 10000 false Chr07: 54054918-54064917 Eucalyptus grandis
Eucgr.G03333 10.0kb downstream 10.0kb downstream 14239 true Chr07: 54064918-54079156 Eucalyptus grandis
Eucgr.G03333 10.0kb downstream 10.0kb downstream 10000 false Chr07: 54069157-54079156 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061690 5270 Rosid View MSA
123738207 5271 Pentapetalae View MSA
122788620 5272 Eudicot View MSA
122046833 5273 Angiosperm View MSA
121346612 5274 Embryophyte View MSA
123427528 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.2966 0.0 50.2982    
cufflinks 8.49627 0.0 21.8575    
cufflinks 15.3523 0.0 35.4493    
cufflinks 3.8278 0.0 9.80245   Low
cufflinks 5.76475 0.0 13.9239    
cufflinks 48.4996 0.0 112.496 High High

0 Strain