Gene : Eucgr.G03335 E. grandis v2.0
Defline:  (1 of 3) PF03350 - Uncharacterized protein family, UPF0114 (UPF0114) Genomic Order:  2777
Name:  ? Eucgr.G03335 Secondary Identifier:  ? PAC:32071635
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G03335 0.5kb upstream 0.5kb upstream 3914 true Chr07: 54088862-54092775 Eucalyptus grandis
Eucgr.G03335 0.5kb upstream 0.5kb upstream 500 false Chr07: 54092276-54092775 Eucalyptus grandis
Eucgr.G03335 0.5kb downstream 0.5kb downstream 3914 true Chr07: 54088362-54092275 Eucalyptus grandis
Eucgr.G03335 0.5kb downstream 0.5kb downstream 500 false Chr07: 54088362-54088861 Eucalyptus grandis
Eucgr.G03335 1.0kb upstream 1.0kb upstream 4414 true Chr07: 54088862-54093275 Eucalyptus grandis
Eucgr.G03335 1.0kb upstream 1.0kb upstream 1000 false Chr07: 54092276-54093275 Eucalyptus grandis
Eucgr.G03335 1.0kb downstream 1.0kb downstream 4414 true Chr07: 54087862-54092275 Eucalyptus grandis
Eucgr.G03335 1.0kb downstream 1.0kb downstream 1000 false Chr07: 54087862-54088861 Eucalyptus grandis
Eucgr.G03335 2.0kb upstream 2.0kb upstream 5414 true Chr07: 54088862-54094275 Eucalyptus grandis
Eucgr.G03335 2.0kb upstream 2.0kb upstream 2000 false Chr07: 54092276-54094275 Eucalyptus grandis
Eucgr.G03335 2.0kb downstream 2.0kb downstream 5414 true Chr07: 54086862-54092275 Eucalyptus grandis
Eucgr.G03335 2.0kb downstream 2.0kb downstream 2000 false Chr07: 54086862-54088861 Eucalyptus grandis
Eucgr.G03335 5.0kb upstream 5.0kb upstream 8414 true Chr07: 54088862-54097275 Eucalyptus grandis
Eucgr.G03335 5.0kb upstream 5.0kb upstream 5000 false Chr07: 54092276-54097275 Eucalyptus grandis
Eucgr.G03335 5.0kb downstream 5.0kb downstream 8414 true Chr07: 54083862-54092275 Eucalyptus grandis
Eucgr.G03335 5.0kb downstream 5.0kb downstream 5000 false Chr07: 54083862-54088861 Eucalyptus grandis
Eucgr.G03335 10.0kb upstream 10.0kb upstream 13414 true Chr07: 54088862-54102275 Eucalyptus grandis
Eucgr.G03335 10.0kb upstream 10.0kb upstream 10000 false Chr07: 54092276-54102275 Eucalyptus grandis
Eucgr.G03335 10.0kb downstream 10.0kb downstream 13414 true Chr07: 54078862-54092275 Eucalyptus grandis
Eucgr.G03335 10.0kb downstream 10.0kb downstream 10000 false Chr07: 54078862-54088861 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062348 5270 Rosid View MSA
123737999 5271 Pentapetalae View MSA
122786601 5272 Eudicot View MSA
122048009 5273 Angiosperm View MSA
121348495 5274 Embryophyte View MSA
123426050 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.211 0.0 41.8491    
cufflinks 11.939 0.0 28.2979    
cufflinks 17.1301 0.0 39.4382    
cufflinks 6.99391 0.0 17.4299   Low
cufflinks 18.8298 0.0 43.0515    
cufflinks 74.9343 0.0 166.249 High High

0 Strain