Gene : Eucgr.G03312 E. grandis v2.0
Defline:  (1 of 5) 5.4.99.8 - Cycloartenol synthase / 2,3-epoxysqualene--cycloartenol cyclase Genomic Order:  2758
Name:  ? Eucgr.G03312 Secondary Identifier:  ? PAC:32070439
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-2541 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G03312 0.5kb upstream 0.5kb upstream 8120 true Chr07: 53729109-53737228 Eucalyptus grandis
Eucgr.G03312 0.5kb upstream 0.5kb upstream 500 false Chr07: 53736729-53737228 Eucalyptus grandis
Eucgr.G03312 0.5kb downstream 0.5kb downstream 8120 true Chr07: 53728609-53736728 Eucalyptus grandis
Eucgr.G03312 0.5kb downstream 0.5kb downstream 500 false Chr07: 53728609-53729108 Eucalyptus grandis
Eucgr.G03312 1.0kb upstream 1.0kb upstream 8620 true Chr07: 53729109-53737728 Eucalyptus grandis
Eucgr.G03312 1.0kb upstream 1.0kb upstream 1000 false Chr07: 53736729-53737728 Eucalyptus grandis
Eucgr.G03312 1.0kb downstream 1.0kb downstream 8620 true Chr07: 53728109-53736728 Eucalyptus grandis
Eucgr.G03312 1.0kb downstream 1.0kb downstream 1000 false Chr07: 53728109-53729108 Eucalyptus grandis
Eucgr.G03312 2.0kb upstream 2.0kb upstream 9620 true Chr07: 53729109-53738728 Eucalyptus grandis
Eucgr.G03312 2.0kb upstream 2.0kb upstream 2000 false Chr07: 53736729-53738728 Eucalyptus grandis
Eucgr.G03312 2.0kb downstream 2.0kb downstream 9620 true Chr07: 53727109-53736728 Eucalyptus grandis
Eucgr.G03312 2.0kb downstream 2.0kb downstream 2000 false Chr07: 53727109-53729108 Eucalyptus grandis
Eucgr.G03312 5.0kb upstream 5.0kb upstream 12620 true Chr07: 53729109-53741728 Eucalyptus grandis
Eucgr.G03312 5.0kb upstream 5.0kb upstream 5000 false Chr07: 53736729-53741728 Eucalyptus grandis
Eucgr.G03312 5.0kb downstream 5.0kb downstream 12620 true Chr07: 53724109-53736728 Eucalyptus grandis
Eucgr.G03312 5.0kb downstream 5.0kb downstream 5000 false Chr07: 53724109-53729108 Eucalyptus grandis
Eucgr.G03312 10.0kb upstream 10.0kb upstream 17620 true Chr07: 53729109-53746728 Eucalyptus grandis
Eucgr.G03312 10.0kb upstream 10.0kb upstream 10000 false Chr07: 53736729-53746728 Eucalyptus grandis
Eucgr.G03312 10.0kb downstream 10.0kb downstream 17620 true Chr07: 53719109-53736728 Eucalyptus grandis
Eucgr.G03312 10.0kb downstream 10.0kb downstream 10000 false Chr07: 53719109-53729108 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124075439 5270 Rosid View MSA
123750129 5271 Pentapetalae View MSA
122795524 5272 Eudicot View MSA
122043543 5273 Angiosperm View MSA
121345283 5274 Embryophyte View MSA
123424991 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain