Gene : Eucgr.G03321 E. grandis v2.0
Defline:  (1 of 2) PTHR12385:SF4 - PROTEIN PNS1 Genomic Order:  2766
Name:  ? Eucgr.G03321 Secondary Identifier:  ? PAC:32073210
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G03321 0.5kb upstream 0.5kb upstream 3880 true Chr07: 53905410-53909289 Eucalyptus grandis
Eucgr.G03321 0.5kb upstream 0.5kb upstream 500 false Chr07: 53908790-53909289 Eucalyptus grandis
Eucgr.G03321 0.5kb downstream 0.5kb downstream 3880 true Chr07: 53904910-53908789 Eucalyptus grandis
Eucgr.G03321 0.5kb downstream 0.5kb downstream 500 false Chr07: 53904910-53905409 Eucalyptus grandis
Eucgr.G03321 1.0kb upstream 1.0kb upstream 4380 true Chr07: 53905410-53909789 Eucalyptus grandis
Eucgr.G03321 1.0kb upstream 1.0kb upstream 1000 false Chr07: 53908790-53909789 Eucalyptus grandis
Eucgr.G03321 1.0kb downstream 1.0kb downstream 4380 true Chr07: 53904410-53908789 Eucalyptus grandis
Eucgr.G03321 1.0kb downstream 1.0kb downstream 1000 false Chr07: 53904410-53905409 Eucalyptus grandis
Eucgr.G03321 2.0kb upstream 2.0kb upstream 5380 true Chr07: 53905410-53910789 Eucalyptus grandis
Eucgr.G03321 2.0kb upstream 2.0kb upstream 2000 false Chr07: 53908790-53910789 Eucalyptus grandis
Eucgr.G03321 2.0kb downstream 2.0kb downstream 5380 true Chr07: 53903410-53908789 Eucalyptus grandis
Eucgr.G03321 2.0kb downstream 2.0kb downstream 2000 false Chr07: 53903410-53905409 Eucalyptus grandis
Eucgr.G03321 5.0kb upstream 5.0kb upstream 8380 true Chr07: 53905410-53913789 Eucalyptus grandis
Eucgr.G03321 5.0kb upstream 5.0kb upstream 5000 false Chr07: 53908790-53913789 Eucalyptus grandis
Eucgr.G03321 5.0kb downstream 5.0kb downstream 8380 true Chr07: 53900410-53908789 Eucalyptus grandis
Eucgr.G03321 5.0kb downstream 5.0kb downstream 5000 false Chr07: 53900410-53905409 Eucalyptus grandis
Eucgr.G03321 10.0kb upstream 10.0kb upstream 13380 true Chr07: 53905410-53918789 Eucalyptus grandis
Eucgr.G03321 10.0kb upstream 10.0kb upstream 10000 false Chr07: 53908790-53918789 Eucalyptus grandis
Eucgr.G03321 10.0kb downstream 10.0kb downstream 13380 true Chr07: 53895410-53908789 Eucalyptus grandis
Eucgr.G03321 10.0kb downstream 10.0kb downstream 10000 false Chr07: 53895410-53905409 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064134 5270 Rosid View MSA
123745461 5271 Pentapetalae View MSA
122789891 5272 Eudicot View MSA
122050147 5273 Angiosperm View MSA
121349087 5274 Embryophyte View MSA
123381160 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.5376 0.0 38.8439   High
cufflinks 8.12005 0.0 18.4644    
cufflinks 18.7633 0.0 41.516   High
cufflinks 4.57737 0.0 10.8718    
cufflinks 4.1914 0.0 10.0791   Low
cufflinks 5.69632 0.0 13.4303    

0 Strain