Gene : Eucgr.G03275 E. grandis v2.0
Defline:  (1 of 2) PTHR23334 - CCAAT/ENHANCER BINDING PROTEIN Genomic Order:  2729
Name:  ? Eucgr.G03275 Secondary Identifier:  ? PAC:32072474
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G03275 0.5kb upstream 0.5kb upstream 1502 true Chr07: 53366433-53367934 Eucalyptus grandis
Eucgr.G03275 0.5kb upstream 0.5kb upstream 500 false Chr07: 53367435-53367934 Eucalyptus grandis
Eucgr.G03275 0.5kb downstream 0.5kb downstream 1502 true Chr07: 53365933-53367434 Eucalyptus grandis
Eucgr.G03275 0.5kb downstream 0.5kb downstream 500 false Chr07: 53365933-53366432 Eucalyptus grandis
Eucgr.G03275 1.0kb upstream 1.0kb upstream 2002 true Chr07: 53366433-53368434 Eucalyptus grandis
Eucgr.G03275 1.0kb upstream 1.0kb upstream 1000 false Chr07: 53367435-53368434 Eucalyptus grandis
Eucgr.G03275 1.0kb downstream 1.0kb downstream 2002 true Chr07: 53365433-53367434 Eucalyptus grandis
Eucgr.G03275 1.0kb downstream 1.0kb downstream 1000 false Chr07: 53365433-53366432 Eucalyptus grandis
Eucgr.G03275 2.0kb upstream 2.0kb upstream 3002 true Chr07: 53366433-53369434 Eucalyptus grandis
Eucgr.G03275 2.0kb upstream 2.0kb upstream 2000 false Chr07: 53367435-53369434 Eucalyptus grandis
Eucgr.G03275 2.0kb downstream 2.0kb downstream 3002 true Chr07: 53364433-53367434 Eucalyptus grandis
Eucgr.G03275 2.0kb downstream 2.0kb downstream 2000 false Chr07: 53364433-53366432 Eucalyptus grandis
Eucgr.G03275 5.0kb upstream 5.0kb upstream 6002 true Chr07: 53366433-53372434 Eucalyptus grandis
Eucgr.G03275 5.0kb upstream 5.0kb upstream 5000 false Chr07: 53367435-53372434 Eucalyptus grandis
Eucgr.G03275 5.0kb downstream 5.0kb downstream 6002 true Chr07: 53361433-53367434 Eucalyptus grandis
Eucgr.G03275 5.0kb downstream 5.0kb downstream 5000 false Chr07: 53361433-53366432 Eucalyptus grandis
Eucgr.G03275 10.0kb upstream 10.0kb upstream 11002 true Chr07: 53366433-53377434 Eucalyptus grandis
Eucgr.G03275 10.0kb upstream 10.0kb upstream 10000 false Chr07: 53367435-53377434 Eucalyptus grandis
Eucgr.G03275 10.0kb downstream 10.0kb downstream 11002 true Chr07: 53356433-53367434 Eucalyptus grandis
Eucgr.G03275 10.0kb downstream 10.0kb downstream 10000 false Chr07: 53356433-53366432 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070072 5270 Rosid View MSA
123749570 5271 Pentapetalae View MSA
122773209 5272 Eudicot View MSA
122050154 5273 Angiosperm View MSA
121349674 5274 Embryophyte View MSA
123381395 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.49253 0.0 6.92838    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.61731 0.0 7.25634    
cufflinks 1.07693 0.0 3.28399    
cufflinks 0.4605 0.0 1.55896 Low Low
cufflinks 5.96559 0.0 15.3155   High

0 Strain