Gene : Eucgr.G03172 E. grandis v2.0
Defline:  (1 of 1) PTHR13355:SF12 - GCN5-RELATED N-ACETYLTRANSFERASE (GNAT) FAMILY PROTEIN Genomic Order:  2634
Name:  ? Eucgr.G03172 Secondary Identifier:  ? PAC:32073560
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis UDPNACETYLGALSYN-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G03172 0.5kb upstream 0.5kb upstream 3128 true Chr07: 52704369-52707496 Eucalyptus grandis
Eucgr.G03172 0.5kb upstream 0.5kb upstream 500 false Chr07: 52706997-52707496 Eucalyptus grandis
Eucgr.G03172 0.5kb downstream 0.5kb downstream 3128 true Chr07: 52703869-52706996 Eucalyptus grandis
Eucgr.G03172 0.5kb downstream 0.5kb downstream 500 false Chr07: 52703869-52704368 Eucalyptus grandis
Eucgr.G03172 1.0kb upstream 1.0kb upstream 3628 true Chr07: 52704369-52707996 Eucalyptus grandis
Eucgr.G03172 1.0kb upstream 1.0kb upstream 1000 false Chr07: 52706997-52707996 Eucalyptus grandis
Eucgr.G03172 1.0kb downstream 1.0kb downstream 3628 true Chr07: 52703369-52706996 Eucalyptus grandis
Eucgr.G03172 1.0kb downstream 1.0kb downstream 1000 false Chr07: 52703369-52704368 Eucalyptus grandis
Eucgr.G03172 2.0kb upstream 2.0kb upstream 4628 true Chr07: 52704369-52708996 Eucalyptus grandis
Eucgr.G03172 2.0kb upstream 2.0kb upstream 2000 false Chr07: 52706997-52708996 Eucalyptus grandis
Eucgr.G03172 2.0kb downstream 2.0kb downstream 4628 true Chr07: 52702369-52706996 Eucalyptus grandis
Eucgr.G03172 2.0kb downstream 2.0kb downstream 2000 false Chr07: 52702369-52704368 Eucalyptus grandis
Eucgr.G03172 5.0kb upstream 5.0kb upstream 7628 true Chr07: 52704369-52711996 Eucalyptus grandis
Eucgr.G03172 5.0kb upstream 5.0kb upstream 5000 false Chr07: 52706997-52711996 Eucalyptus grandis
Eucgr.G03172 5.0kb downstream 5.0kb downstream 7628 true Chr07: 52699369-52706996 Eucalyptus grandis
Eucgr.G03172 5.0kb downstream 5.0kb downstream 5000 false Chr07: 52699369-52704368 Eucalyptus grandis
Eucgr.G03172 10.0kb upstream 10.0kb upstream 12628 true Chr07: 52704369-52716996 Eucalyptus grandis
Eucgr.G03172 10.0kb upstream 10.0kb upstream 10000 false Chr07: 52706997-52716996 Eucalyptus grandis
Eucgr.G03172 10.0kb downstream 10.0kb downstream 12628 true Chr07: 52694369-52706996 Eucalyptus grandis
Eucgr.G03172 10.0kb downstream 10.0kb downstream 10000 false Chr07: 52694369-52704368 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063813 5270 Rosid View MSA
123749165 5271 Pentapetalae View MSA
122794919 5272 Eudicot View MSA
122047532 5273 Angiosperm View MSA
123428893 5275 Viridiplantae View MSA
121347611 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.83201 0.0 24.505    
cufflinks 7.66356 0.0 19.6905    
cufflinks 5.78678 0.0 15.3476   Low
cufflinks 9.23908 0.0 23.391    
cufflinks 12.0421 0.0 29.6065   High
cufflinks 9.35341 0.0 23.247    

0 Strain