Gene : Eucgr.G03148 E. grandis v2.0
Defline:  (1 of 1) PTHR10566//PTHR10566:SF41 - CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED Genomic Order:  2615
Name:  ? Eucgr.G03148 Secondary Identifier:  ? PAC:32070206
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G03148 0.5kb upstream 0.5kb upstream 6364 true Chr07: 52462879-52469242 Eucalyptus grandis
Eucgr.G03148 0.5kb upstream 0.5kb upstream 500 false Chr07: 52462879-52463378 Eucalyptus grandis
Eucgr.G03148 0.5kb downstream 0.5kb downstream 6364 true Chr07: 52463379-52469742 Eucalyptus grandis
Eucgr.G03148 0.5kb downstream 0.5kb downstream 500 false Chr07: 52469243-52469742 Eucalyptus grandis
Eucgr.G03148 1.0kb upstream 1.0kb upstream 6864 true Chr07: 52462379-52469242 Eucalyptus grandis
Eucgr.G03148 1.0kb upstream 1.0kb upstream 1000 false Chr07: 52462379-52463378 Eucalyptus grandis
Eucgr.G03148 1.0kb downstream 1.0kb downstream 6864 true Chr07: 52463379-52470242 Eucalyptus grandis
Eucgr.G03148 1.0kb downstream 1.0kb downstream 1000 false Chr07: 52469243-52470242 Eucalyptus grandis
Eucgr.G03148 2.0kb upstream 2.0kb upstream 7864 true Chr07: 52461379-52469242 Eucalyptus grandis
Eucgr.G03148 2.0kb upstream 2.0kb upstream 2000 false Chr07: 52461379-52463378 Eucalyptus grandis
Eucgr.G03148 2.0kb downstream 2.0kb downstream 7864 true Chr07: 52463379-52471242 Eucalyptus grandis
Eucgr.G03148 2.0kb downstream 2.0kb downstream 2000 false Chr07: 52469243-52471242 Eucalyptus grandis
Eucgr.G03148 5.0kb upstream 5.0kb upstream 10864 true Chr07: 52458379-52469242 Eucalyptus grandis
Eucgr.G03148 5.0kb upstream 5.0kb upstream 5000 false Chr07: 52458379-52463378 Eucalyptus grandis
Eucgr.G03148 5.0kb downstream 5.0kb downstream 10864 true Chr07: 52463379-52474242 Eucalyptus grandis
Eucgr.G03148 5.0kb downstream 5.0kb downstream 5000 false Chr07: 52469243-52474242 Eucalyptus grandis
Eucgr.G03148 10.0kb upstream 10.0kb upstream 15864 true Chr07: 52453379-52469242 Eucalyptus grandis
Eucgr.G03148 10.0kb upstream 10.0kb upstream 10000 false Chr07: 52453379-52463378 Eucalyptus grandis
Eucgr.G03148 10.0kb downstream 10.0kb downstream 15864 true Chr07: 52463379-52479242 Eucalyptus grandis
Eucgr.G03148 10.0kb downstream 10.0kb downstream 10000 false Chr07: 52469243-52479242 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063210 5270 Rosid View MSA
123737935 5271 Pentapetalae View MSA
122792314 5272 Eudicot View MSA
122043555 5273 Angiosperm View MSA
121347120 5274 Embryophyte View MSA
123426388 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.36305 0.0 8.40838    
cufflinks 2.96249 0.0 7.44122    
cufflinks 2.82044 0.0 7.14952    
cufflinks 1.79679 0.0 4.73498    
cufflinks 2.28609 0.0 5.90851    
cufflinks 16.9544 0.0 37.7062   High

0 Strain