Gene : Eucgr.G03098 E. grandis v2.0
Defline:  (1 of 2) PTHR11709:SF22 - LACCASE-12-RELATED Genomic Order:  2568
Name:  ? Eucgr.G03098 Secondary Identifier:  ? PAC:32072126
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5466 Eucalyptus grandis pathologic  
Egrandis PWY-6824 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G03098 0.5kb upstream 0.5kb upstream 4100 true Chr07: 52080685-52084784 Eucalyptus grandis
Eucgr.G03098 0.5kb upstream 0.5kb upstream 500 false Chr07: 52084285-52084784 Eucalyptus grandis
Eucgr.G03098 0.5kb downstream 0.5kb downstream 4100 true Chr07: 52080185-52084284 Eucalyptus grandis
Eucgr.G03098 0.5kb downstream 0.5kb downstream 500 false Chr07: 52080185-52080684 Eucalyptus grandis
Eucgr.G03098 1.0kb upstream 1.0kb upstream 4600 true Chr07: 52080685-52085284 Eucalyptus grandis
Eucgr.G03098 1.0kb upstream 1.0kb upstream 1000 false Chr07: 52084285-52085284 Eucalyptus grandis
Eucgr.G03098 1.0kb downstream 1.0kb downstream 4600 true Chr07: 52079685-52084284 Eucalyptus grandis
Eucgr.G03098 1.0kb downstream 1.0kb downstream 1000 false Chr07: 52079685-52080684 Eucalyptus grandis
Eucgr.G03098 2.0kb upstream 2.0kb upstream 5600 true Chr07: 52080685-52086284 Eucalyptus grandis
Eucgr.G03098 2.0kb upstream 2.0kb upstream 2000 false Chr07: 52084285-52086284 Eucalyptus grandis
Eucgr.G03098 2.0kb downstream 2.0kb downstream 5600 true Chr07: 52078685-52084284 Eucalyptus grandis
Eucgr.G03098 2.0kb downstream 2.0kb downstream 2000 false Chr07: 52078685-52080684 Eucalyptus grandis
Eucgr.G03098 5.0kb upstream 5.0kb upstream 8600 true Chr07: 52080685-52089284 Eucalyptus grandis
Eucgr.G03098 5.0kb upstream 5.0kb upstream 5000 false Chr07: 52084285-52089284 Eucalyptus grandis
Eucgr.G03098 5.0kb downstream 5.0kb downstream 8600 true Chr07: 52075685-52084284 Eucalyptus grandis
Eucgr.G03098 5.0kb downstream 5.0kb downstream 5000 false Chr07: 52075685-52080684 Eucalyptus grandis
Eucgr.G03098 10.0kb upstream 10.0kb upstream 13600 true Chr07: 52080685-52094284 Eucalyptus grandis
Eucgr.G03098 10.0kb upstream 10.0kb upstream 10000 false Chr07: 52084285-52094284 Eucalyptus grandis
Eucgr.G03098 10.0kb downstream 10.0kb downstream 13600 true Chr07: 52070685-52084284 Eucalyptus grandis
Eucgr.G03098 10.0kb downstream 10.0kb downstream 10000 false Chr07: 52070685-52080684 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063263 5270 Rosid View MSA
123746086 5271 Pentapetalae View MSA
122788360 5272 Eudicot View MSA
122044394 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.10931 0.0 3.11378   Low
cufflinks 119.008 0.0 282.282 High  
cufflinks 2.81089 0.0 7.23497    
cufflinks 386.888 0.0 1055.01 High High
cufflinks 8.58471 0.0 19.7726    
cufflinks 4.20997 0.0 10.288    

0 Strain