Gene : Eucgr.G03104 E. grandis v2.0
Defline:  (1 of 5) PF07145 - Ataxin-2 C-terminal region (PAM2) Genomic Order:  2573
Name:  ? Eucgr.G03104 Secondary Identifier:  ? PAC:32073459
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G03104 0.5kb upstream 0.5kb upstream 1949 true Chr07: 52117350-52119298 Eucalyptus grandis
Eucgr.G03104 0.5kb upstream 0.5kb upstream 500 false Chr07: 52117350-52117849 Eucalyptus grandis
Eucgr.G03104 0.5kb downstream 0.5kb downstream 1949 true Chr07: 52117850-52119798 Eucalyptus grandis
Eucgr.G03104 0.5kb downstream 0.5kb downstream 500 false Chr07: 52119299-52119798 Eucalyptus grandis
Eucgr.G03104 1.0kb upstream 1.0kb upstream 2449 true Chr07: 52116850-52119298 Eucalyptus grandis
Eucgr.G03104 1.0kb upstream 1.0kb upstream 1000 false Chr07: 52116850-52117849 Eucalyptus grandis
Eucgr.G03104 1.0kb downstream 1.0kb downstream 2449 true Chr07: 52117850-52120298 Eucalyptus grandis
Eucgr.G03104 1.0kb downstream 1.0kb downstream 1000 false Chr07: 52119299-52120298 Eucalyptus grandis
Eucgr.G03104 2.0kb upstream 2.0kb upstream 3449 true Chr07: 52115850-52119298 Eucalyptus grandis
Eucgr.G03104 2.0kb upstream 2.0kb upstream 2000 false Chr07: 52115850-52117849 Eucalyptus grandis
Eucgr.G03104 2.0kb downstream 2.0kb downstream 3449 true Chr07: 52117850-52121298 Eucalyptus grandis
Eucgr.G03104 2.0kb downstream 2.0kb downstream 2000 false Chr07: 52119299-52121298 Eucalyptus grandis
Eucgr.G03104 5.0kb upstream 5.0kb upstream 6449 true Chr07: 52112850-52119298 Eucalyptus grandis
Eucgr.G03104 5.0kb upstream 5.0kb upstream 5000 false Chr07: 52112850-52117849 Eucalyptus grandis
Eucgr.G03104 5.0kb downstream 5.0kb downstream 6449 true Chr07: 52117850-52124298 Eucalyptus grandis
Eucgr.G03104 5.0kb downstream 5.0kb downstream 5000 false Chr07: 52119299-52124298 Eucalyptus grandis
Eucgr.G03104 10.0kb upstream 10.0kb upstream 11449 true Chr07: 52107850-52119298 Eucalyptus grandis
Eucgr.G03104 10.0kb upstream 10.0kb upstream 10000 false Chr07: 52107850-52117849 Eucalyptus grandis
Eucgr.G03104 10.0kb downstream 10.0kb downstream 11449 true Chr07: 52117850-52129298 Eucalyptus grandis
Eucgr.G03104 10.0kb downstream 10.0kb downstream 10000 false Chr07: 52119299-52129298 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070675 5270 Rosid View MSA
123742369 5271 Pentapetalae View MSA
122796171 5272 Eudicot View MSA
122048247 5273 Angiosperm View MSA
121345899 5274 Embryophyte View MSA
123380287 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 267.388 0.0 767.94 High High
cufflinks 80.1232 0.0 186.181 High  
cufflinks 115.636 0.0 272.017 High  
cufflinks 36.1129 0.0 85.5189   Low
cufflinks 52.004 0.0 133.344 High  
cufflinks 209.009 0.0 507.748 High  

0 Strain