Gene : Eucgr.G03083 E. grandis v2.0
Defline:  (1 of 1) PTHR12585:SF26 - SISTER CHROMATID COHESION 1 PROTEIN 1 Genomic Order:  2553
Name:  ? Eucgr.G03083 Secondary Identifier:  ? PAC:32071953
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G03083 0.5kb upstream 0.5kb upstream 6199 true Chr07: 51979397-51985595 Eucalyptus grandis
Eucgr.G03083 0.5kb upstream 0.5kb upstream 500 false Chr07: 51985096-51985595 Eucalyptus grandis
Eucgr.G03083 0.5kb downstream 0.5kb downstream 6199 true Chr07: 51978897-51985095 Eucalyptus grandis
Eucgr.G03083 0.5kb downstream 0.5kb downstream 500 false Chr07: 51978897-51979396 Eucalyptus grandis
Eucgr.G03083 1.0kb upstream 1.0kb upstream 6699 true Chr07: 51979397-51986095 Eucalyptus grandis
Eucgr.G03083 1.0kb upstream 1.0kb upstream 1000 false Chr07: 51985096-51986095 Eucalyptus grandis
Eucgr.G03083 1.0kb downstream 1.0kb downstream 6699 true Chr07: 51978397-51985095 Eucalyptus grandis
Eucgr.G03083 1.0kb downstream 1.0kb downstream 1000 false Chr07: 51978397-51979396 Eucalyptus grandis
Eucgr.G03083 2.0kb upstream 2.0kb upstream 7699 true Chr07: 51979397-51987095 Eucalyptus grandis
Eucgr.G03083 2.0kb upstream 2.0kb upstream 2000 false Chr07: 51985096-51987095 Eucalyptus grandis
Eucgr.G03083 2.0kb downstream 2.0kb downstream 7699 true Chr07: 51977397-51985095 Eucalyptus grandis
Eucgr.G03083 2.0kb downstream 2.0kb downstream 2000 false Chr07: 51977397-51979396 Eucalyptus grandis
Eucgr.G03083 5.0kb upstream 5.0kb upstream 10699 true Chr07: 51979397-51990095 Eucalyptus grandis
Eucgr.G03083 5.0kb upstream 5.0kb upstream 5000 false Chr07: 51985096-51990095 Eucalyptus grandis
Eucgr.G03083 5.0kb downstream 5.0kb downstream 10699 true Chr07: 51974397-51985095 Eucalyptus grandis
Eucgr.G03083 5.0kb downstream 5.0kb downstream 5000 false Chr07: 51974397-51979396 Eucalyptus grandis
Eucgr.G03083 10.0kb upstream 10.0kb upstream 15699 true Chr07: 51979397-51995095 Eucalyptus grandis
Eucgr.G03083 10.0kb upstream 10.0kb upstream 10000 false Chr07: 51985096-51995095 Eucalyptus grandis
Eucgr.G03083 10.0kb downstream 10.0kb downstream 15699 true Chr07: 51969397-51985095 Eucalyptus grandis
Eucgr.G03083 10.0kb downstream 10.0kb downstream 10000 false Chr07: 51969397-51979396 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060947 5270 Rosid View MSA
123744806 5271 Pentapetalae View MSA
122792997 5272 Eudicot View MSA
122042862 5273 Angiosperm View MSA
121347788 5274 Embryophyte View MSA
123426470 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.293684 0.0 0.947907 Low  
cufflinks 0.881212 0.0 2.49572    
cufflinks 0.0962948 0.0 0.360964 Low Low
cufflinks 1.5676 0.0 4.19668   High
cufflinks 0.592128 0.0 1.7468 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain