Gene : Eucgr.G03062 E. grandis v2.0
Defline:  (1 of 2) PTHR12210:SF57 - HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN Genomic Order:  2532
Name:  ? Eucgr.G03062 Secondary Identifier:  ? PAC:32070960
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G03062 0.5kb upstream 0.5kb upstream 3956 true Chr07: 51796986-51800941 Eucalyptus grandis
Eucgr.G03062 0.5kb upstream 0.5kb upstream 500 false Chr07: 51800442-51800941 Eucalyptus grandis
Eucgr.G03062 0.5kb downstream 0.5kb downstream 3956 true Chr07: 51796486-51800441 Eucalyptus grandis
Eucgr.G03062 0.5kb downstream 0.5kb downstream 500 false Chr07: 51796486-51796985 Eucalyptus grandis
Eucgr.G03062 1.0kb upstream 1.0kb upstream 4456 true Chr07: 51796986-51801441 Eucalyptus grandis
Eucgr.G03062 1.0kb upstream 1.0kb upstream 1000 false Chr07: 51800442-51801441 Eucalyptus grandis
Eucgr.G03062 1.0kb downstream 1.0kb downstream 4456 true Chr07: 51795986-51800441 Eucalyptus grandis
Eucgr.G03062 1.0kb downstream 1.0kb downstream 1000 false Chr07: 51795986-51796985 Eucalyptus grandis
Eucgr.G03062 2.0kb upstream 2.0kb upstream 5456 true Chr07: 51796986-51802441 Eucalyptus grandis
Eucgr.G03062 2.0kb upstream 2.0kb upstream 2000 false Chr07: 51800442-51802441 Eucalyptus grandis
Eucgr.G03062 2.0kb downstream 2.0kb downstream 5456 true Chr07: 51794986-51800441 Eucalyptus grandis
Eucgr.G03062 2.0kb downstream 2.0kb downstream 2000 false Chr07: 51794986-51796985 Eucalyptus grandis
Eucgr.G03062 5.0kb upstream 5.0kb upstream 8456 true Chr07: 51796986-51805441 Eucalyptus grandis
Eucgr.G03062 5.0kb upstream 5.0kb upstream 5000 false Chr07: 51800442-51805441 Eucalyptus grandis
Eucgr.G03062 5.0kb downstream 5.0kb downstream 8456 true Chr07: 51791986-51800441 Eucalyptus grandis
Eucgr.G03062 5.0kb downstream 5.0kb downstream 5000 false Chr07: 51791986-51796985 Eucalyptus grandis
Eucgr.G03062 10.0kb upstream 10.0kb upstream 13456 true Chr07: 51796986-51810441 Eucalyptus grandis
Eucgr.G03062 10.0kb upstream 10.0kb upstream 10000 false Chr07: 51800442-51810441 Eucalyptus grandis
Eucgr.G03062 10.0kb downstream 10.0kb downstream 13456 true Chr07: 51786986-51800441 Eucalyptus grandis
Eucgr.G03062 10.0kb downstream 10.0kb downstream 10000 false Chr07: 51786986-51796985 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073385 5270 Rosid View MSA
123737180 5271 Pentapetalae View MSA
122791950 5272 Eudicot View MSA
122050524 5273 Angiosperm View MSA
123429149 5275 Viridiplantae View MSA
121311967 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.1722 0.0 34.9065    
cufflinks 3.98013 0.0 11.008   Low
cufflinks 16.0258 0.0 38.9059    
cufflinks 10.8112 0.0 28.5071    
cufflinks 10.1367 0.0 24.1383    
cufflinks 26.7613 0.0 60.9904   High

0 Strain