Gene : Eucgr.G03030 E. grandis v2.0
Defline:  (1 of 1) PTHR24006:SF428 - CORONATINE-INSENSITIVE PROTEIN 1 Genomic Order:  2502
Name:  ? Eucgr.G03030 Secondary Identifier:  ? PAC:32071585
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G03030 0.5kb upstream 0.5kb upstream 6083 true Chr07: 51516019-51522101 Eucalyptus grandis
Eucgr.G03030 0.5kb upstream 0.5kb upstream 500 false Chr07: 51521602-51522101 Eucalyptus grandis
Eucgr.G03030 0.5kb downstream 0.5kb downstream 6083 true Chr07: 51515519-51521601 Eucalyptus grandis
Eucgr.G03030 0.5kb downstream 0.5kb downstream 500 false Chr07: 51515519-51516018 Eucalyptus grandis
Eucgr.G03030 1.0kb upstream 1.0kb upstream 6583 true Chr07: 51516019-51522601 Eucalyptus grandis
Eucgr.G03030 1.0kb upstream 1.0kb upstream 1000 false Chr07: 51521602-51522601 Eucalyptus grandis
Eucgr.G03030 1.0kb downstream 1.0kb downstream 6583 true Chr07: 51515019-51521601 Eucalyptus grandis
Eucgr.G03030 1.0kb downstream 1.0kb downstream 1000 false Chr07: 51515019-51516018 Eucalyptus grandis
Eucgr.G03030 2.0kb upstream 2.0kb upstream 7583 true Chr07: 51516019-51523601 Eucalyptus grandis
Eucgr.G03030 2.0kb upstream 2.0kb upstream 2000 false Chr07: 51521602-51523601 Eucalyptus grandis
Eucgr.G03030 2.0kb downstream 2.0kb downstream 7583 true Chr07: 51514019-51521601 Eucalyptus grandis
Eucgr.G03030 2.0kb downstream 2.0kb downstream 2000 false Chr07: 51514019-51516018 Eucalyptus grandis
Eucgr.G03030 5.0kb upstream 5.0kb upstream 10583 true Chr07: 51516019-51526601 Eucalyptus grandis
Eucgr.G03030 5.0kb upstream 5.0kb upstream 5000 false Chr07: 51521602-51526601 Eucalyptus grandis
Eucgr.G03030 5.0kb downstream 5.0kb downstream 10583 true Chr07: 51511019-51521601 Eucalyptus grandis
Eucgr.G03030 5.0kb downstream 5.0kb downstream 5000 false Chr07: 51511019-51516018 Eucalyptus grandis
Eucgr.G03030 10.0kb upstream 10.0kb upstream 15583 true Chr07: 51516019-51531601 Eucalyptus grandis
Eucgr.G03030 10.0kb upstream 10.0kb upstream 10000 false Chr07: 51521602-51531601 Eucalyptus grandis
Eucgr.G03030 10.0kb downstream 10.0kb downstream 15583 true Chr07: 51506019-51521601 Eucalyptus grandis
Eucgr.G03030 10.0kb downstream 10.0kb downstream 10000 false Chr07: 51506019-51516018 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062956 5270 Rosid View MSA
123749708 5271 Pentapetalae View MSA
122790201 5272 Eudicot View MSA
122042626 5273 Angiosperm View MSA
121349676 5274 Embryophyte View MSA
123381396 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.239 0.0 42.554   Low
cufflinks 100.114 0.0 243.911 High  
cufflinks 23.3256 0.0 51.7126    
cufflinks 113.782 0.0 281.814 High High
cufflinks 92.4949 0.0 223.287 High  
cufflinks 21.6734 0.0 47.9904    

0 Strain