Gene : Eucgr.H00238 E. grandis v2.0
Defline:  (1 of 3) PTHR10804:SF9 - METHIONINE AMINOPEPTIDASE 2 Genomic Order:  2
Name:  ? Eucgr.H00238 Secondary Identifier:  ? PAC:32041095
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00238 0.5kb upstream 0.5kb upstream 7861 true Chr08: 184190-192050 Eucalyptus grandis
Eucgr.H00238 0.5kb upstream 0.5kb upstream 500 false Chr08: 184190-184689 Eucalyptus grandis
Eucgr.H00238 0.5kb downstream 0.5kb downstream 7861 true Chr08: 184690-192550 Eucalyptus grandis
Eucgr.H00238 0.5kb downstream 0.5kb downstream 500 false Chr08: 192051-192550 Eucalyptus grandis
Eucgr.H00238 1.0kb upstream 1.0kb upstream 8361 true Chr08: 183690-192050 Eucalyptus grandis
Eucgr.H00238 1.0kb upstream 1.0kb upstream 1000 false Chr08: 183690-184689 Eucalyptus grandis
Eucgr.H00238 1.0kb downstream 1.0kb downstream 8361 true Chr08: 184690-193050 Eucalyptus grandis
Eucgr.H00238 1.0kb downstream 1.0kb downstream 1000 false Chr08: 192051-193050 Eucalyptus grandis
Eucgr.H00238 2.0kb upstream 2.0kb upstream 9361 true Chr08: 182690-192050 Eucalyptus grandis
Eucgr.H00238 2.0kb upstream 2.0kb upstream 2000 false Chr08: 182690-184689 Eucalyptus grandis
Eucgr.H00238 2.0kb downstream 2.0kb downstream 9361 true Chr08: 184690-194050 Eucalyptus grandis
Eucgr.H00238 2.0kb downstream 2.0kb downstream 2000 false Chr08: 192051-194050 Eucalyptus grandis
Eucgr.H00238 5.0kb upstream 5.0kb upstream 12361 true Chr08: 179690-192050 Eucalyptus grandis
Eucgr.H00238 5.0kb upstream 5.0kb upstream 5000 false Chr08: 179690-184689 Eucalyptus grandis
Eucgr.H00238 5.0kb downstream 5.0kb downstream 12361 true Chr08: 184690-197050 Eucalyptus grandis
Eucgr.H00238 5.0kb downstream 5.0kb downstream 5000 false Chr08: 192051-197050 Eucalyptus grandis
Eucgr.H00238 10.0kb upstream 10.0kb upstream 17361 true Chr08: 174690-192050 Eucalyptus grandis
Eucgr.H00238 10.0kb upstream 10.0kb upstream 10000 false Chr08: 174690-184689 Eucalyptus grandis
Eucgr.H00238 10.0kb downstream 10.0kb downstream 17361 true Chr08: 184690-202050 Eucalyptus grandis
Eucgr.H00238 10.0kb downstream 10.0kb downstream 10000 false Chr08: 192051-202050 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066616 5270 Rosid View MSA
123741819 5271 Pentapetalae View MSA
122792205 5272 Eudicot View MSA
122044459 5273 Angiosperm View MSA
121345658 5274 Embryophyte View MSA
123424700 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.8632 0.0 56.1338    
cufflinks 21.9339 0.0 49.2601   Low
cufflinks 26.375 0.0 68.1195 High  
cufflinks 27.9467 0.0 71.1485   High
cufflinks 24.0046 0.0 59.0353    
cufflinks 26.135 0.0 64.4815    

0 Strain