Gene : Eucgr.H00227 E. grandis v2.0
Defline:  (1 of 11) 2.3.1.119//2.3.1.199 - Very-long-chain 3-oxoacyl-CoA synthase / Very-long-chain beta-ketoacyl-CoA synthase Genomic Order:  451
Name:  ? Eucgr.H00227 Secondary Identifier:  ? PAC:32044306
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5080 Eucalyptus grandis pathologic  
Egrandis PWY-6433 Eucalyptus grandis pathologic  
Egrandis PWY-6598 Eucalyptus grandis pathologic  
Egrandis PWY-7036 Eucalyptus grandis pathologic  
Egrandis PWY-7601 Eucalyptus grandis pathologic  
Egrandis PWY-7606 Eucalyptus grandis pathologic  
Egrandis PWY-7619 Eucalyptus grandis pathologic  
Egrandis PWY-7726 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00227 0.5kb upstream 0.5kb upstream 2910 true Chr08: 6336304-6339213 Eucalyptus grandis
Eucgr.H00227 0.5kb upstream 0.5kb upstream 500 false Chr08: 6336304-6336803 Eucalyptus grandis
Eucgr.H00227 0.5kb downstream 0.5kb downstream 2910 true Chr08: 6336804-6339713 Eucalyptus grandis
Eucgr.H00227 0.5kb downstream 0.5kb downstream 500 false Chr08: 6339214-6339713 Eucalyptus grandis
Eucgr.H00227 1.0kb upstream 1.0kb upstream 3410 true Chr08: 6335804-6339213 Eucalyptus grandis
Eucgr.H00227 1.0kb upstream 1.0kb upstream 1000 false Chr08: 6335804-6336803 Eucalyptus grandis
Eucgr.H00227 1.0kb downstream 1.0kb downstream 3410 true Chr08: 6336804-6340213 Eucalyptus grandis
Eucgr.H00227 1.0kb downstream 1.0kb downstream 1000 false Chr08: 6339214-6340213 Eucalyptus grandis
Eucgr.H00227 2.0kb upstream 2.0kb upstream 4410 true Chr08: 6334804-6339213 Eucalyptus grandis
Eucgr.H00227 2.0kb upstream 2.0kb upstream 2000 false Chr08: 6334804-6336803 Eucalyptus grandis
Eucgr.H00227 2.0kb downstream 2.0kb downstream 4410 true Chr08: 6336804-6341213 Eucalyptus grandis
Eucgr.H00227 2.0kb downstream 2.0kb downstream 2000 false Chr08: 6339214-6341213 Eucalyptus grandis
Eucgr.H00227 5.0kb upstream 5.0kb upstream 7410 true Chr08: 6331804-6339213 Eucalyptus grandis
Eucgr.H00227 5.0kb upstream 5.0kb upstream 5000 false Chr08: 6331804-6336803 Eucalyptus grandis
Eucgr.H00227 5.0kb downstream 5.0kb downstream 7410 true Chr08: 6336804-6344213 Eucalyptus grandis
Eucgr.H00227 5.0kb downstream 5.0kb downstream 5000 false Chr08: 6339214-6344213 Eucalyptus grandis
Eucgr.H00227 10.0kb upstream 10.0kb upstream 12410 true Chr08: 6326804-6339213 Eucalyptus grandis
Eucgr.H00227 10.0kb upstream 10.0kb upstream 10000 false Chr08: 6326804-6336803 Eucalyptus grandis
Eucgr.H00227 10.0kb downstream 10.0kb downstream 12410 true Chr08: 6336804-6349213 Eucalyptus grandis
Eucgr.H00227 10.0kb downstream 10.0kb downstream 10000 false Chr08: 6339214-6349213 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070809 5270 Rosid View MSA
123743172 5271 Pentapetalae View MSA
122795166 5272 Eudicot View MSA
122051961 5273 Angiosperm View MSA
121349296 5274 Embryophyte View MSA
123425974 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.04316E-5 0.0 0.00475926 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain