Gene : Eucgr.H00174 E. grandis v2.0
Defline:  (1 of 1) PTHR23042:SF72 - TRANSCRIPTION FACTOR BHLH104-RELATED Genomic Order:  402
Name:  ? Eucgr.H00174 Secondary Identifier:  ? PAC:32042911
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00174 0.5kb upstream 0.5kb upstream 3920 true Chr08: 5507827-5511746 Eucalyptus grandis
Eucgr.H00174 0.5kb upstream 0.5kb upstream 500 false Chr08: 5507827-5508326 Eucalyptus grandis
Eucgr.H00174 0.5kb downstream 0.5kb downstream 3920 true Chr08: 5508327-5512246 Eucalyptus grandis
Eucgr.H00174 0.5kb downstream 0.5kb downstream 500 false Chr08: 5511747-5512246 Eucalyptus grandis
Eucgr.H00174 1.0kb upstream 1.0kb upstream 4420 true Chr08: 5507327-5511746 Eucalyptus grandis
Eucgr.H00174 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5507327-5508326 Eucalyptus grandis
Eucgr.H00174 1.0kb downstream 1.0kb downstream 4420 true Chr08: 5508327-5512746 Eucalyptus grandis
Eucgr.H00174 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5511747-5512746 Eucalyptus grandis
Eucgr.H00174 2.0kb upstream 2.0kb upstream 5420 true Chr08: 5506327-5511746 Eucalyptus grandis
Eucgr.H00174 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5506327-5508326 Eucalyptus grandis
Eucgr.H00174 2.0kb downstream 2.0kb downstream 5420 true Chr08: 5508327-5513746 Eucalyptus grandis
Eucgr.H00174 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5511747-5513746 Eucalyptus grandis
Eucgr.H00174 5.0kb upstream 5.0kb upstream 8420 true Chr08: 5503327-5511746 Eucalyptus grandis
Eucgr.H00174 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5503327-5508326 Eucalyptus grandis
Eucgr.H00174 5.0kb downstream 5.0kb downstream 8420 true Chr08: 5508327-5516746 Eucalyptus grandis
Eucgr.H00174 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5511747-5516746 Eucalyptus grandis
Eucgr.H00174 10.0kb upstream 10.0kb upstream 13420 true Chr08: 5498327-5511746 Eucalyptus grandis
Eucgr.H00174 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5498327-5508326 Eucalyptus grandis
Eucgr.H00174 10.0kb downstream 10.0kb downstream 13420 true Chr08: 5508327-5521746 Eucalyptus grandis
Eucgr.H00174 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5511747-5521746 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074840 5270 Rosid View MSA
123739971 5271 Pentapetalae View MSA
122794387 5272 Eudicot View MSA
122050434 5273 Angiosperm View MSA
121311906 5274 Embryophyte View MSA
123427389 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.1464 0.0 33.1322   High
cufflinks 5.86439 0.0 15.0678   Low
cufflinks 11.3443 0.0 27.2313    
cufflinks 7.26598 0.0 18.2747    
cufflinks 6.37028 0.0 16.1903    
cufflinks 8.94259 0.0 21.6927    

0 Strain