Gene : Eucgr.H00144 E. grandis v2.0
Defline:  (1 of 11) PF04755 - PAP_fibrillin (PAP_fibrillin) Genomic Order:  374
Name:  ? Eucgr.H00144 Secondary Identifier:  ? PAC:32043771
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00144 0.5kb upstream 0.5kb upstream 3482 true Chr08: 5146144-5149625 Eucalyptus grandis
Eucgr.H00144 0.5kb upstream 0.5kb upstream 500 false Chr08: 5146144-5146643 Eucalyptus grandis
Eucgr.H00144 0.5kb downstream 0.5kb downstream 3482 true Chr08: 5146644-5150125 Eucalyptus grandis
Eucgr.H00144 0.5kb downstream 0.5kb downstream 500 false Chr08: 5149626-5150125 Eucalyptus grandis
Eucgr.H00144 1.0kb upstream 1.0kb upstream 3982 true Chr08: 5145644-5149625 Eucalyptus grandis
Eucgr.H00144 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5145644-5146643 Eucalyptus grandis
Eucgr.H00144 1.0kb downstream 1.0kb downstream 3982 true Chr08: 5146644-5150625 Eucalyptus grandis
Eucgr.H00144 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5149626-5150625 Eucalyptus grandis
Eucgr.H00144 2.0kb upstream 2.0kb upstream 4982 true Chr08: 5144644-5149625 Eucalyptus grandis
Eucgr.H00144 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5144644-5146643 Eucalyptus grandis
Eucgr.H00144 2.0kb downstream 2.0kb downstream 4982 true Chr08: 5146644-5151625 Eucalyptus grandis
Eucgr.H00144 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5149626-5151625 Eucalyptus grandis
Eucgr.H00144 5.0kb upstream 5.0kb upstream 7982 true Chr08: 5141644-5149625 Eucalyptus grandis
Eucgr.H00144 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5141644-5146643 Eucalyptus grandis
Eucgr.H00144 5.0kb downstream 5.0kb downstream 7982 true Chr08: 5146644-5154625 Eucalyptus grandis
Eucgr.H00144 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5149626-5154625 Eucalyptus grandis
Eucgr.H00144 10.0kb upstream 10.0kb upstream 12982 true Chr08: 5136644-5149625 Eucalyptus grandis
Eucgr.H00144 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5136644-5146643 Eucalyptus grandis
Eucgr.H00144 10.0kb downstream 10.0kb downstream 12982 true Chr08: 5146644-5159625 Eucalyptus grandis
Eucgr.H00144 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5149626-5159625 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068895 5270 Rosid View MSA
123753457 5271 Pentapetalae View MSA
122789473 5272 Eudicot View MSA
122042297 5273 Angiosperm View MSA
121345801 5274 Embryophyte View MSA
123427802 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.47941 0.0 16.4438    
cufflinks 2.28458 0.0 6.70003    
cufflinks 4.57562 0.0 12.4816    
cufflinks 1.0913 0.0 3.75596   Low
cufflinks 2.44249 0.0 7.08567    
cufflinks 51.1289 0.0 115.323 High High

0 Strain