Gene : Eucgr.H00153 E. grandis v2.0
Defline:  (1 of 3) PTHR31189:SF1 - 12S SEED STORAGE PROTEIN CRA1-RELATED Genomic Order:  383
Name:  ? Eucgr.H00153 Secondary Identifier:  ? PAC:32045087
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00153 0.5kb upstream 0.5kb upstream 3193 true Chr08: 5228369-5231561 Eucalyptus grandis
Eucgr.H00153 0.5kb upstream 0.5kb upstream 500 false Chr08: 5228369-5228868 Eucalyptus grandis
Eucgr.H00153 0.5kb downstream 0.5kb downstream 3193 true Chr08: 5228869-5232061 Eucalyptus grandis
Eucgr.H00153 0.5kb downstream 0.5kb downstream 500 false Chr08: 5231562-5232061 Eucalyptus grandis
Eucgr.H00153 1.0kb upstream 1.0kb upstream 3693 true Chr08: 5227869-5231561 Eucalyptus grandis
Eucgr.H00153 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5227869-5228868 Eucalyptus grandis
Eucgr.H00153 1.0kb downstream 1.0kb downstream 3693 true Chr08: 5228869-5232561 Eucalyptus grandis
Eucgr.H00153 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5231562-5232561 Eucalyptus grandis
Eucgr.H00153 2.0kb upstream 2.0kb upstream 4693 true Chr08: 5226869-5231561 Eucalyptus grandis
Eucgr.H00153 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5226869-5228868 Eucalyptus grandis
Eucgr.H00153 2.0kb downstream 2.0kb downstream 4693 true Chr08: 5228869-5233561 Eucalyptus grandis
Eucgr.H00153 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5231562-5233561 Eucalyptus grandis
Eucgr.H00153 5.0kb upstream 5.0kb upstream 7693 true Chr08: 5223869-5231561 Eucalyptus grandis
Eucgr.H00153 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5223869-5228868 Eucalyptus grandis
Eucgr.H00153 5.0kb downstream 5.0kb downstream 7693 true Chr08: 5228869-5236561 Eucalyptus grandis
Eucgr.H00153 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5231562-5236561 Eucalyptus grandis
Eucgr.H00153 10.0kb upstream 10.0kb upstream 12693 true Chr08: 5218869-5231561 Eucalyptus grandis
Eucgr.H00153 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5218869-5228868 Eucalyptus grandis
Eucgr.H00153 10.0kb downstream 10.0kb downstream 12693 true Chr08: 5228869-5241561 Eucalyptus grandis
Eucgr.H00153 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5231562-5241561 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062039 5270 Rosid View MSA
123752500 5271 Pentapetalae View MSA
122788518 5272 Eudicot View MSA
122051681 5273 Angiosperm View MSA
121312610 5274 Embryophyte View MSA
123349767 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain