Gene : Eucgr.H00159 E. grandis v2.0
Defline:  (1 of 2) PTHR11455:SF24 - CRYPTOCHROME-1 Genomic Order:  388
Name:  ? Eucgr.H00159 Secondary Identifier:  ? PAC:32042872
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00159 0.5kb upstream 0.5kb upstream 5898 true Chr08: 5280427-5286324 Eucalyptus grandis
Eucgr.H00159 0.5kb upstream 0.5kb upstream 500 false Chr08: 5280427-5280926 Eucalyptus grandis
Eucgr.H00159 0.5kb downstream 0.5kb downstream 5898 true Chr08: 5280927-5286824 Eucalyptus grandis
Eucgr.H00159 0.5kb downstream 0.5kb downstream 500 false Chr08: 5286325-5286824 Eucalyptus grandis
Eucgr.H00159 1.0kb upstream 1.0kb upstream 6398 true Chr08: 5279927-5286324 Eucalyptus grandis
Eucgr.H00159 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5279927-5280926 Eucalyptus grandis
Eucgr.H00159 1.0kb downstream 1.0kb downstream 6398 true Chr08: 5280927-5287324 Eucalyptus grandis
Eucgr.H00159 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5286325-5287324 Eucalyptus grandis
Eucgr.H00159 2.0kb upstream 2.0kb upstream 7398 true Chr08: 5278927-5286324 Eucalyptus grandis
Eucgr.H00159 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5278927-5280926 Eucalyptus grandis
Eucgr.H00159 2.0kb downstream 2.0kb downstream 7398 true Chr08: 5280927-5288324 Eucalyptus grandis
Eucgr.H00159 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5286325-5288324 Eucalyptus grandis
Eucgr.H00159 5.0kb upstream 5.0kb upstream 10398 true Chr08: 5275927-5286324 Eucalyptus grandis
Eucgr.H00159 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5275927-5280926 Eucalyptus grandis
Eucgr.H00159 5.0kb downstream 5.0kb downstream 10398 true Chr08: 5280927-5291324 Eucalyptus grandis
Eucgr.H00159 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5286325-5291324 Eucalyptus grandis
Eucgr.H00159 10.0kb upstream 10.0kb upstream 15398 true Chr08: 5270927-5286324 Eucalyptus grandis
Eucgr.H00159 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5270927-5280926 Eucalyptus grandis
Eucgr.H00159 10.0kb downstream 10.0kb downstream 15398 true Chr08: 5280927-5296324 Eucalyptus grandis
Eucgr.H00159 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5286325-5296324 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066295 5270 Rosid View MSA
123738147 5271 Pentapetalae View MSA
122792892 5272 Eudicot View MSA
122048329 5273 Angiosperm View MSA
121343845 5274 Embryophyte View MSA
123428792 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.793 0.0 6.63173    
cufflinks 5.89876 0.0 13.2368    
cufflinks 3.66143 0.0 8.4715    
cufflinks 3.72577 0.0 8.5909    
cufflinks 1.39417 0.0 3.54333   Low
cufflinks 13.8201 0.0 30.5701   High

0 Strain