Gene : Eucgr.H00160 E. grandis v2.0
Defline:  (1 of 1) PTHR33317:SF2 - HOLLIDAY JUNCTION RESOLVASE-RELATED Genomic Order:  389
Name:  ? Eucgr.H00160 Secondary Identifier:  ? PAC:32042918
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00160 0.5kb upstream 0.5kb upstream 3182 true Chr08: 5286970-5290151 Eucalyptus grandis
Eucgr.H00160 0.5kb upstream 0.5kb upstream 500 false Chr08: 5286970-5287469 Eucalyptus grandis
Eucgr.H00160 0.5kb downstream 0.5kb downstream 3182 true Chr08: 5287470-5290651 Eucalyptus grandis
Eucgr.H00160 0.5kb downstream 0.5kb downstream 500 false Chr08: 5290152-5290651 Eucalyptus grandis
Eucgr.H00160 1.0kb upstream 1.0kb upstream 3682 true Chr08: 5286470-5290151 Eucalyptus grandis
Eucgr.H00160 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5286470-5287469 Eucalyptus grandis
Eucgr.H00160 1.0kb downstream 1.0kb downstream 3682 true Chr08: 5287470-5291151 Eucalyptus grandis
Eucgr.H00160 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5290152-5291151 Eucalyptus grandis
Eucgr.H00160 2.0kb upstream 2.0kb upstream 4682 true Chr08: 5285470-5290151 Eucalyptus grandis
Eucgr.H00160 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5285470-5287469 Eucalyptus grandis
Eucgr.H00160 2.0kb downstream 2.0kb downstream 4682 true Chr08: 5287470-5292151 Eucalyptus grandis
Eucgr.H00160 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5290152-5292151 Eucalyptus grandis
Eucgr.H00160 5.0kb upstream 5.0kb upstream 7682 true Chr08: 5282470-5290151 Eucalyptus grandis
Eucgr.H00160 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5282470-5287469 Eucalyptus grandis
Eucgr.H00160 5.0kb downstream 5.0kb downstream 7682 true Chr08: 5287470-5295151 Eucalyptus grandis
Eucgr.H00160 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5290152-5295151 Eucalyptus grandis
Eucgr.H00160 10.0kb upstream 10.0kb upstream 12682 true Chr08: 5277470-5290151 Eucalyptus grandis
Eucgr.H00160 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5277470-5287469 Eucalyptus grandis
Eucgr.H00160 10.0kb downstream 10.0kb downstream 12682 true Chr08: 5287470-5300151 Eucalyptus grandis
Eucgr.H00160 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5290152-5300151 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062281 5270 Rosid View MSA
123739595 5271 Pentapetalae View MSA
122790899 5272 Eudicot View MSA
122046304 5273 Angiosperm View MSA
121343915 5274 Embryophyte View MSA
123426695 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.66704 0.0 21.4107   High
cufflinks 2.10266 0.0 5.95504   Low
cufflinks 5.43708 0.0 14.0824    
cufflinks 2.64652 0.0 7.33477    
cufflinks 2.99534 0.0 8.21395    
cufflinks 6.15102 0.0 15.7915    

0 Strain