Gene : Eucgr.H00131 E. grandis v2.0
Defline:  (1 of 4) PTHR31717:SF15 - CCT MOTIF-CONTAINING PROTEIN Genomic Order:  361
Name:  ? Eucgr.H00131 Secondary Identifier:  ? PAC:32042565
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00131 0.5kb upstream 0.5kb upstream 2251 true Chr08: 5007024-5009274 Eucalyptus grandis
Eucgr.H00131 0.5kb upstream 0.5kb upstream 500 false Chr08: 5007024-5007523 Eucalyptus grandis
Eucgr.H00131 0.5kb downstream 0.5kb downstream 2251 true Chr08: 5007524-5009774 Eucalyptus grandis
Eucgr.H00131 0.5kb downstream 0.5kb downstream 500 false Chr08: 5009275-5009774 Eucalyptus grandis
Eucgr.H00131 1.0kb upstream 1.0kb upstream 2751 true Chr08: 5006524-5009274 Eucalyptus grandis
Eucgr.H00131 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5006524-5007523 Eucalyptus grandis
Eucgr.H00131 1.0kb downstream 1.0kb downstream 2751 true Chr08: 5007524-5010274 Eucalyptus grandis
Eucgr.H00131 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5009275-5010274 Eucalyptus grandis
Eucgr.H00131 2.0kb upstream 2.0kb upstream 3751 true Chr08: 5005524-5009274 Eucalyptus grandis
Eucgr.H00131 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5005524-5007523 Eucalyptus grandis
Eucgr.H00131 2.0kb downstream 2.0kb downstream 3751 true Chr08: 5007524-5011274 Eucalyptus grandis
Eucgr.H00131 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5009275-5011274 Eucalyptus grandis
Eucgr.H00131 5.0kb upstream 5.0kb upstream 6751 true Chr08: 5002524-5009274 Eucalyptus grandis
Eucgr.H00131 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5002524-5007523 Eucalyptus grandis
Eucgr.H00131 5.0kb downstream 5.0kb downstream 6751 true Chr08: 5007524-5014274 Eucalyptus grandis
Eucgr.H00131 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5009275-5014274 Eucalyptus grandis
Eucgr.H00131 10.0kb upstream 10.0kb upstream 11751 true Chr08: 4997524-5009274 Eucalyptus grandis
Eucgr.H00131 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4997524-5007523 Eucalyptus grandis
Eucgr.H00131 10.0kb downstream 10.0kb downstream 11751 true Chr08: 5007524-5019274 Eucalyptus grandis
Eucgr.H00131 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5009275-5019274 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124052186 5270 Rosid View MSA
123756314 5271 Pentapetalae View MSA
122796554 5272 Eudicot View MSA
122051532 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121351338 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.405605 0.0 1.37312 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain