Gene : Eucgr.H00133 E. grandis v2.0
Defline:  (1 of 6) PF12043 - Domain of unknown function (DUF3527) (DUF3527) Genomic Order:  363
Name:  ? Eucgr.H00133 Secondary Identifier:  ? PAC:32045421
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00133 0.5kb upstream 0.5kb upstream 4200 true Chr08: 5027187-5031386 Eucalyptus grandis
Eucgr.H00133 0.5kb upstream 0.5kb upstream 500 false Chr08: 5027187-5027686 Eucalyptus grandis
Eucgr.H00133 0.5kb downstream 0.5kb downstream 4200 true Chr08: 5027687-5031886 Eucalyptus grandis
Eucgr.H00133 0.5kb downstream 0.5kb downstream 500 false Chr08: 5031387-5031886 Eucalyptus grandis
Eucgr.H00133 1.0kb upstream 1.0kb upstream 4700 true Chr08: 5026687-5031386 Eucalyptus grandis
Eucgr.H00133 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5026687-5027686 Eucalyptus grandis
Eucgr.H00133 1.0kb downstream 1.0kb downstream 4700 true Chr08: 5027687-5032386 Eucalyptus grandis
Eucgr.H00133 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5031387-5032386 Eucalyptus grandis
Eucgr.H00133 2.0kb upstream 2.0kb upstream 5700 true Chr08: 5025687-5031386 Eucalyptus grandis
Eucgr.H00133 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5025687-5027686 Eucalyptus grandis
Eucgr.H00133 2.0kb downstream 2.0kb downstream 5700 true Chr08: 5027687-5033386 Eucalyptus grandis
Eucgr.H00133 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5031387-5033386 Eucalyptus grandis
Eucgr.H00133 5.0kb upstream 5.0kb upstream 8700 true Chr08: 5022687-5031386 Eucalyptus grandis
Eucgr.H00133 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5022687-5027686 Eucalyptus grandis
Eucgr.H00133 5.0kb downstream 5.0kb downstream 8700 true Chr08: 5027687-5036386 Eucalyptus grandis
Eucgr.H00133 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5031387-5036386 Eucalyptus grandis
Eucgr.H00133 10.0kb upstream 10.0kb upstream 13700 true Chr08: 5017687-5031386 Eucalyptus grandis
Eucgr.H00133 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5017687-5027686 Eucalyptus grandis
Eucgr.H00133 10.0kb downstream 10.0kb downstream 13700 true Chr08: 5027687-5041386 Eucalyptus grandis
Eucgr.H00133 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5031387-5041386 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067642 5270 Rosid View MSA
123738704 5271 Pentapetalae View MSA
122792480 5272 Eudicot View MSA
122045948 5273 Angiosperm View MSA
121310528 5274 Embryophyte View MSA
123347988 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.43317 0.0 12.5858   High
cufflinks 1.47812 0.0 3.8482    
cufflinks 7.00512 0.0 15.8808   High
cufflinks 1.22155 0.0 3.23509    
cufflinks 1.69556 0.0 4.38226    
cufflinks 0.744319 0.0 2.10624 Low Low

0 Strain