Gene : Eucgr.H00090 E. grandis v2.0
Defline:  (1 of 2) 2.3.1.16 - Acetyl-CoA C-acyltransferase / Beta-ketothiolase Genomic Order:  324
Name:  ? Eucgr.H00090 Secondary Identifier:  ? PAC:32040919
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5136 Eucalyptus grandis pathologic  
Egrandis PWY-561 Eucalyptus grandis pathologic  
Egrandis PWY-6435 Eucalyptus grandis pathologic  
Egrandis PWY-735 Eucalyptus grandis pathologic  
Egrandis PWY-7606 Eucalyptus grandis pathologic  
Egrandis PWY-7726 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00090 0.5kb upstream 0.5kb upstream 4897 true Chr08: 4647375-4652271 Eucalyptus grandis
Eucgr.H00090 0.5kb upstream 0.5kb upstream 500 false Chr08: 4651772-4652271 Eucalyptus grandis
Eucgr.H00090 0.5kb downstream 0.5kb downstream 4897 true Chr08: 4646875-4651771 Eucalyptus grandis
Eucgr.H00090 0.5kb downstream 0.5kb downstream 500 false Chr08: 4646875-4647374 Eucalyptus grandis
Eucgr.H00090 1.0kb upstream 1.0kb upstream 5397 true Chr08: 4647375-4652771 Eucalyptus grandis
Eucgr.H00090 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4651772-4652771 Eucalyptus grandis
Eucgr.H00090 1.0kb downstream 1.0kb downstream 5397 true Chr08: 4646375-4651771 Eucalyptus grandis
Eucgr.H00090 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4646375-4647374 Eucalyptus grandis
Eucgr.H00090 2.0kb upstream 2.0kb upstream 6397 true Chr08: 4647375-4653771 Eucalyptus grandis
Eucgr.H00090 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4651772-4653771 Eucalyptus grandis
Eucgr.H00090 2.0kb downstream 2.0kb downstream 6397 true Chr08: 4645375-4651771 Eucalyptus grandis
Eucgr.H00090 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4645375-4647374 Eucalyptus grandis
Eucgr.H00090 5.0kb upstream 5.0kb upstream 9397 true Chr08: 4647375-4656771 Eucalyptus grandis
Eucgr.H00090 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4651772-4656771 Eucalyptus grandis
Eucgr.H00090 5.0kb downstream 5.0kb downstream 9397 true Chr08: 4642375-4651771 Eucalyptus grandis
Eucgr.H00090 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4642375-4647374 Eucalyptus grandis
Eucgr.H00090 10.0kb upstream 10.0kb upstream 14397 true Chr08: 4647375-4661771 Eucalyptus grandis
Eucgr.H00090 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4651772-4661771 Eucalyptus grandis
Eucgr.H00090 10.0kb downstream 10.0kb downstream 14397 true Chr08: 4637375-4651771 Eucalyptus grandis
Eucgr.H00090 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4637375-4647374 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065110 5270 Rosid View MSA
123750766 5271 Pentapetalae View MSA
122786071 5272 Eudicot View MSA
122045703 5273 Angiosperm View MSA
121347485 5274 Embryophyte View MSA
123424542 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 53.714 0.0 126.803 High  
cufflinks 39.1073 0.0 90.019    
cufflinks 36.2149 0.0 82.936 High  
cufflinks 45.9668 0.0 107.04 High  
cufflinks 24.2107 0.0 54.2933   Low
cufflinks 66.8134 0.0 160.283 High High

0 Strain