Gene : Eucgr.H00111 E. grandis v2.0
Defline:  (1 of 1) PTHR18937//PTHR18937:SF220 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER Genomic Order:  343
Name:  ? Eucgr.H00111 Secondary Identifier:  ? PAC:32045765
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00111 0.5kb upstream 0.5kb upstream 14143 true Chr08: 4859375-4873517 Eucalyptus grandis
Eucgr.H00111 0.5kb upstream 0.5kb upstream 500 false Chr08: 4859375-4859874 Eucalyptus grandis
Eucgr.H00111 0.5kb downstream 0.5kb downstream 14143 true Chr08: 4859875-4874017 Eucalyptus grandis
Eucgr.H00111 0.5kb downstream 0.5kb downstream 500 false Chr08: 4873518-4874017 Eucalyptus grandis
Eucgr.H00111 1.0kb upstream 1.0kb upstream 14643 true Chr08: 4858875-4873517 Eucalyptus grandis
Eucgr.H00111 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4858875-4859874 Eucalyptus grandis
Eucgr.H00111 1.0kb downstream 1.0kb downstream 14643 true Chr08: 4859875-4874517 Eucalyptus grandis
Eucgr.H00111 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4873518-4874517 Eucalyptus grandis
Eucgr.H00111 2.0kb upstream 2.0kb upstream 15643 true Chr08: 4857875-4873517 Eucalyptus grandis
Eucgr.H00111 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4857875-4859874 Eucalyptus grandis
Eucgr.H00111 2.0kb downstream 2.0kb downstream 15643 true Chr08: 4859875-4875517 Eucalyptus grandis
Eucgr.H00111 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4873518-4875517 Eucalyptus grandis
Eucgr.H00111 5.0kb upstream 5.0kb upstream 18643 true Chr08: 4854875-4873517 Eucalyptus grandis
Eucgr.H00111 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4854875-4859874 Eucalyptus grandis
Eucgr.H00111 5.0kb downstream 5.0kb downstream 18643 true Chr08: 4859875-4878517 Eucalyptus grandis
Eucgr.H00111 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4873518-4878517 Eucalyptus grandis
Eucgr.H00111 10.0kb upstream 10.0kb upstream 23643 true Chr08: 4849875-4873517 Eucalyptus grandis
Eucgr.H00111 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4849875-4859874 Eucalyptus grandis
Eucgr.H00111 10.0kb downstream 10.0kb downstream 23643 true Chr08: 4859875-4883517 Eucalyptus grandis
Eucgr.H00111 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4873518-4883517 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066833 5270 Rosid View MSA
123743772 5271 Pentapetalae View MSA
122789162 5272 Eudicot View MSA
122046769 5273 Angiosperm View MSA
121349344 5274 Embryophyte View MSA
123425955 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.1221 0.0 31.2425    
cufflinks 23.4508 0.0 52.2316    
cufflinks 12.9881 0.0 28.7441    
cufflinks 27.499 0.0 61.5991   High
cufflinks 10.5188 0.0 23.3595   Low
cufflinks 16.8612 0.0 37.2875    

0 Strain