Gene : Eucgr.H00074 E. grandis v2.0
Defline:  (1 of 1) KOG0265//KOG1407 - U5 snRNP-specific protein-like factor and related proteins // WD40 repeat protein Genomic Order:  309
Name:  ? Eucgr.H00074 Secondary Identifier:  ? PAC:32042856
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00074 0.5kb upstream 0.5kb upstream 4862 true Chr08: 4474787-4479648 Eucalyptus grandis
Eucgr.H00074 0.5kb upstream 0.5kb upstream 500 false Chr08: 4479149-4479648 Eucalyptus grandis
Eucgr.H00074 0.5kb downstream 0.5kb downstream 4862 true Chr08: 4474287-4479148 Eucalyptus grandis
Eucgr.H00074 0.5kb downstream 0.5kb downstream 500 false Chr08: 4474287-4474786 Eucalyptus grandis
Eucgr.H00074 1.0kb upstream 1.0kb upstream 5362 true Chr08: 4474787-4480148 Eucalyptus grandis
Eucgr.H00074 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4479149-4480148 Eucalyptus grandis
Eucgr.H00074 1.0kb downstream 1.0kb downstream 5362 true Chr08: 4473787-4479148 Eucalyptus grandis
Eucgr.H00074 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4473787-4474786 Eucalyptus grandis
Eucgr.H00074 2.0kb upstream 2.0kb upstream 6362 true Chr08: 4474787-4481148 Eucalyptus grandis
Eucgr.H00074 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4479149-4481148 Eucalyptus grandis
Eucgr.H00074 2.0kb downstream 2.0kb downstream 6362 true Chr08: 4472787-4479148 Eucalyptus grandis
Eucgr.H00074 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4472787-4474786 Eucalyptus grandis
Eucgr.H00074 5.0kb upstream 5.0kb upstream 9362 true Chr08: 4474787-4484148 Eucalyptus grandis
Eucgr.H00074 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4479149-4484148 Eucalyptus grandis
Eucgr.H00074 5.0kb downstream 5.0kb downstream 9362 true Chr08: 4469787-4479148 Eucalyptus grandis
Eucgr.H00074 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4469787-4474786 Eucalyptus grandis
Eucgr.H00074 10.0kb upstream 10.0kb upstream 14362 true Chr08: 4474787-4489148 Eucalyptus grandis
Eucgr.H00074 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4479149-4489148 Eucalyptus grandis
Eucgr.H00074 10.0kb downstream 10.0kb downstream 14362 true Chr08: 4464787-4479148 Eucalyptus grandis
Eucgr.H00074 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4464787-4474786 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026331 5273 Angiosperm View MSA
124051139 5270 Rosid View MSA
123748270 5271 Pentapetalae View MSA
122796771 5272 Eudicot View MSA
121345084 5274 Embryophyte View MSA
123424015 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.7109 0.0 36.5413    
cufflinks 13.1436 0.0 32.0019   Low
cufflinks 13.9721 0.0 33.3239    
cufflinks 15.1849 0.0 39.8149    
cufflinks 18.8866 0.0 43.6094   High
cufflinks 17.6036 0.0 41.1162    

0 Strain