Gene : Eucgr.H00041 E. grandis v2.0
Defline:  (1 of 1) PTHR12526//PTHR12526:SF351 - GLYCOSYLTRANSFERASE Genomic Order:  279
Name:  ? Eucgr.H00041 Secondary Identifier:  ? PAC:32041425
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-7238 Eucalyptus grandis pathologic  
Egrandis SUCSYN-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00041 0.5kb upstream 0.5kb upstream 8854 true Chr08: 4175146-4183999 Eucalyptus grandis
Eucgr.H00041 0.5kb upstream 0.5kb upstream 500 false Chr08: 4175146-4175645 Eucalyptus grandis
Eucgr.H00041 0.5kb downstream 0.5kb downstream 8854 true Chr08: 4175646-4184499 Eucalyptus grandis
Eucgr.H00041 0.5kb downstream 0.5kb downstream 500 false Chr08: 4184000-4184499 Eucalyptus grandis
Eucgr.H00041 1.0kb upstream 1.0kb upstream 9354 true Chr08: 4174646-4183999 Eucalyptus grandis
Eucgr.H00041 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4174646-4175645 Eucalyptus grandis
Eucgr.H00041 1.0kb downstream 1.0kb downstream 9354 true Chr08: 4175646-4184999 Eucalyptus grandis
Eucgr.H00041 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4184000-4184999 Eucalyptus grandis
Eucgr.H00041 2.0kb upstream 2.0kb upstream 10354 true Chr08: 4173646-4183999 Eucalyptus grandis
Eucgr.H00041 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4173646-4175645 Eucalyptus grandis
Eucgr.H00041 2.0kb downstream 2.0kb downstream 10354 true Chr08: 4175646-4185999 Eucalyptus grandis
Eucgr.H00041 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4184000-4185999 Eucalyptus grandis
Eucgr.H00041 5.0kb upstream 5.0kb upstream 13354 true Chr08: 4170646-4183999 Eucalyptus grandis
Eucgr.H00041 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4170646-4175645 Eucalyptus grandis
Eucgr.H00041 5.0kb downstream 5.0kb downstream 13354 true Chr08: 4175646-4188999 Eucalyptus grandis
Eucgr.H00041 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4184000-4188999 Eucalyptus grandis
Eucgr.H00041 10.0kb upstream 10.0kb upstream 18354 true Chr08: 4165646-4183999 Eucalyptus grandis
Eucgr.H00041 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4165646-4175645 Eucalyptus grandis
Eucgr.H00041 10.0kb downstream 10.0kb downstream 18354 true Chr08: 4175646-4193999 Eucalyptus grandis
Eucgr.H00041 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4184000-4193999 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060783 5270 Rosid View MSA
123737048 5271 Pentapetalae View MSA
122785600 5272 Eudicot View MSA
122049216 5273 Angiosperm View MSA
121347172 5274 Embryophyte View MSA
123427859 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0879551 0.0 0.29966 Low  
cufflinks 0.270367 0.0 0.800086 Low  
cufflinks 0.149831 0.0 0.475165 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.38337 0.0 7.79641   High

0 Strain