Gene : Eucgr.H00056 E. grandis v2.0
Defline:  (1 of 9) PTHR31321:SF11 - PECTINESTERASE 10-RELATED Genomic Order:  293
Name:  ? Eucgr.H00056 Secondary Identifier:  ? PAC:32045791
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-1081 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00056 0.5kb upstream 0.5kb upstream 2831 true Chr08: 4297630-4300460 Eucalyptus grandis
Eucgr.H00056 0.5kb upstream 0.5kb upstream 500 false Chr08: 4299961-4300460 Eucalyptus grandis
Eucgr.H00056 0.5kb downstream 0.5kb downstream 2831 true Chr08: 4297130-4299960 Eucalyptus grandis
Eucgr.H00056 0.5kb downstream 0.5kb downstream 500 false Chr08: 4297130-4297629 Eucalyptus grandis
Eucgr.H00056 1.0kb upstream 1.0kb upstream 3331 true Chr08: 4297630-4300960 Eucalyptus grandis
Eucgr.H00056 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4299961-4300960 Eucalyptus grandis
Eucgr.H00056 1.0kb downstream 1.0kb downstream 3331 true Chr08: 4296630-4299960 Eucalyptus grandis
Eucgr.H00056 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4296630-4297629 Eucalyptus grandis
Eucgr.H00056 2.0kb upstream 2.0kb upstream 4331 true Chr08: 4297630-4301960 Eucalyptus grandis
Eucgr.H00056 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4299961-4301960 Eucalyptus grandis
Eucgr.H00056 2.0kb downstream 2.0kb downstream 4331 true Chr08: 4295630-4299960 Eucalyptus grandis
Eucgr.H00056 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4295630-4297629 Eucalyptus grandis
Eucgr.H00056 5.0kb upstream 5.0kb upstream 7331 true Chr08: 4297630-4304960 Eucalyptus grandis
Eucgr.H00056 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4299961-4304960 Eucalyptus grandis
Eucgr.H00056 5.0kb downstream 5.0kb downstream 7331 true Chr08: 4292630-4299960 Eucalyptus grandis
Eucgr.H00056 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4292630-4297629 Eucalyptus grandis
Eucgr.H00056 10.0kb upstream 10.0kb upstream 12331 true Chr08: 4297630-4309960 Eucalyptus grandis
Eucgr.H00056 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4299961-4309960 Eucalyptus grandis
Eucgr.H00056 10.0kb downstream 10.0kb downstream 12331 true Chr08: 4287630-4299960 Eucalyptus grandis
Eucgr.H00056 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4287630-4297629 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063435 5270 Rosid View MSA
123747897 5271 Pentapetalae View MSA
122796523 5272 Eudicot View MSA
122051382 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain