Gene : Eucgr.H00052 E. grandis v2.0
Defline:  (1 of 3) PTHR13711:SF202 - HIGH MOBILITY GROUP B PROTEIN 10-RELATED Genomic Order:  289
Name:  ? Eucgr.H00052 Secondary Identifier:  ? PAC:32040732
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00052 0.5kb upstream 0.5kb upstream 6205 true Chr08: 4252076-4258280 Eucalyptus grandis
Eucgr.H00052 0.5kb upstream 0.5kb upstream 500 false Chr08: 4257781-4258280 Eucalyptus grandis
Eucgr.H00052 0.5kb downstream 0.5kb downstream 6205 true Chr08: 4251576-4257780 Eucalyptus grandis
Eucgr.H00052 0.5kb downstream 0.5kb downstream 500 false Chr08: 4251576-4252075 Eucalyptus grandis
Eucgr.H00052 1.0kb upstream 1.0kb upstream 6705 true Chr08: 4252076-4258780 Eucalyptus grandis
Eucgr.H00052 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4257781-4258780 Eucalyptus grandis
Eucgr.H00052 1.0kb downstream 1.0kb downstream 6705 true Chr08: 4251076-4257780 Eucalyptus grandis
Eucgr.H00052 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4251076-4252075 Eucalyptus grandis
Eucgr.H00052 2.0kb upstream 2.0kb upstream 7705 true Chr08: 4252076-4259780 Eucalyptus grandis
Eucgr.H00052 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4257781-4259780 Eucalyptus grandis
Eucgr.H00052 2.0kb downstream 2.0kb downstream 7705 true Chr08: 4250076-4257780 Eucalyptus grandis
Eucgr.H00052 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4250076-4252075 Eucalyptus grandis
Eucgr.H00052 5.0kb upstream 5.0kb upstream 10705 true Chr08: 4252076-4262780 Eucalyptus grandis
Eucgr.H00052 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4257781-4262780 Eucalyptus grandis
Eucgr.H00052 5.0kb downstream 5.0kb downstream 10705 true Chr08: 4247076-4257780 Eucalyptus grandis
Eucgr.H00052 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4247076-4252075 Eucalyptus grandis
Eucgr.H00052 10.0kb upstream 10.0kb upstream 15705 true Chr08: 4252076-4267780 Eucalyptus grandis
Eucgr.H00052 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4257781-4267780 Eucalyptus grandis
Eucgr.H00052 10.0kb downstream 10.0kb downstream 15705 true Chr08: 4242076-4257780 Eucalyptus grandis
Eucgr.H00052 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4242076-4252075 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071278 5270 Rosid View MSA
123745117 5271 Pentapetalae View MSA
122793766 5272 Eudicot View MSA
122048952 5273 Angiosperm View MSA
121343849 5274 Embryophyte View MSA
123424352 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.976918 0.0 3.10321   Low
cufflinks 9.97944 0.0 24.4367   High
cufflinks 1.2784 0.0 4.20516   Low
cufflinks 4.25593 0.0 10.4745    
cufflinks 3.56404 0.0 8.94307    
cufflinks 4.71598 0.0 11.4099    

0 Strain