Gene : Eucgr.H00026 E. grandis v2.0
Defline:  (1 of 194) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Genomic Order:  264
Name:  ? Eucgr.H00026 Secondary Identifier:  ? PAC:32044778
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00026 0.5kb upstream 0.5kb upstream 2729 true Chr08: 4065425-4068153 Eucalyptus grandis
Eucgr.H00026 0.5kb upstream 0.5kb upstream 500 false Chr08: 4067654-4068153 Eucalyptus grandis
Eucgr.H00026 0.5kb downstream 0.5kb downstream 2729 true Chr08: 4064925-4067653 Eucalyptus grandis
Eucgr.H00026 0.5kb downstream 0.5kb downstream 500 false Chr08: 4064925-4065424 Eucalyptus grandis
Eucgr.H00026 1.0kb upstream 1.0kb upstream 3229 true Chr08: 4065425-4068653 Eucalyptus grandis
Eucgr.H00026 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4067654-4068653 Eucalyptus grandis
Eucgr.H00026 1.0kb downstream 1.0kb downstream 3229 true Chr08: 4064425-4067653 Eucalyptus grandis
Eucgr.H00026 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4064425-4065424 Eucalyptus grandis
Eucgr.H00026 2.0kb upstream 2.0kb upstream 4229 true Chr08: 4065425-4069653 Eucalyptus grandis
Eucgr.H00026 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4067654-4069653 Eucalyptus grandis
Eucgr.H00026 2.0kb downstream 2.0kb downstream 4229 true Chr08: 4063425-4067653 Eucalyptus grandis
Eucgr.H00026 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4063425-4065424 Eucalyptus grandis
Eucgr.H00026 5.0kb upstream 5.0kb upstream 7229 true Chr08: 4065425-4072653 Eucalyptus grandis
Eucgr.H00026 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4067654-4072653 Eucalyptus grandis
Eucgr.H00026 5.0kb downstream 5.0kb downstream 7229 true Chr08: 4060425-4067653 Eucalyptus grandis
Eucgr.H00026 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4060425-4065424 Eucalyptus grandis
Eucgr.H00026 10.0kb upstream 10.0kb upstream 12229 true Chr08: 4065425-4077653 Eucalyptus grandis
Eucgr.H00026 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4067654-4077653 Eucalyptus grandis
Eucgr.H00026 10.0kb downstream 10.0kb downstream 12229 true Chr08: 4055425-4067653 Eucalyptus grandis
Eucgr.H00026 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4055425-4065424 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061793 5270 Rosid View MSA
123747878 5271 Pentapetalae View MSA
122791665 5272 Eudicot View MSA
122044174 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121348177 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 116.295 0.0 260.092 High  
cufflinks 89.2946 0.0 198.52 High  
cufflinks 101.512 0.0 226.155 High  
cufflinks 102.844 0.0 229.731 High  
cufflinks 261.812 0.0 617.828 High High
cufflinks 93.5283 0.0 207.622 High  

0 Strain