Gene : Eucgr.H00018 E. grandis v2.0
Defline:  (1 of 7) PF03007//PF06974 - Wax ester synthase-like Acyl-CoA acyltransferase domain (WES_acyltransf) // Protein of unknown function (DUF1298) (DUF1298) Genomic Order:  256
Name:  ? Eucgr.H00018 Secondary Identifier:  ? PAC:32041999
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00018 0.5kb upstream 0.5kb upstream 2432 true Chr08: 3991537-3993968 Eucalyptus grandis
Eucgr.H00018 0.5kb upstream 0.5kb upstream 500 false Chr08: 3993469-3993968 Eucalyptus grandis
Eucgr.H00018 0.5kb downstream 0.5kb downstream 2432 true Chr08: 3991037-3993468 Eucalyptus grandis
Eucgr.H00018 0.5kb downstream 0.5kb downstream 500 false Chr08: 3991037-3991536 Eucalyptus grandis
Eucgr.H00018 1.0kb upstream 1.0kb upstream 2932 true Chr08: 3991537-3994468 Eucalyptus grandis
Eucgr.H00018 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3993469-3994468 Eucalyptus grandis
Eucgr.H00018 1.0kb downstream 1.0kb downstream 2932 true Chr08: 3990537-3993468 Eucalyptus grandis
Eucgr.H00018 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3990537-3991536 Eucalyptus grandis
Eucgr.H00018 2.0kb upstream 2.0kb upstream 3932 true Chr08: 3991537-3995468 Eucalyptus grandis
Eucgr.H00018 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3993469-3995468 Eucalyptus grandis
Eucgr.H00018 2.0kb downstream 2.0kb downstream 3932 true Chr08: 3989537-3993468 Eucalyptus grandis
Eucgr.H00018 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3989537-3991536 Eucalyptus grandis
Eucgr.H00018 5.0kb upstream 5.0kb upstream 6932 true Chr08: 3991537-3998468 Eucalyptus grandis
Eucgr.H00018 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3993469-3998468 Eucalyptus grandis
Eucgr.H00018 5.0kb downstream 5.0kb downstream 6932 true Chr08: 3986537-3993468 Eucalyptus grandis
Eucgr.H00018 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3986537-3991536 Eucalyptus grandis
Eucgr.H00018 10.0kb upstream 10.0kb upstream 11932 true Chr08: 3991537-4003468 Eucalyptus grandis
Eucgr.H00018 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3993469-4003468 Eucalyptus grandis
Eucgr.H00018 10.0kb downstream 10.0kb downstream 11932 true Chr08: 3981537-3993468 Eucalyptus grandis
Eucgr.H00018 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3981537-3991536 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072323 5270 Rosid View MSA
123749190 5271 Pentapetalae View MSA
122797420 5272 Eudicot View MSA
122048260 5273 Angiosperm View MSA
123428993 5275 Viridiplantae View MSA
121310908 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.21223 0.0 3.68634    
cufflinks 0.259241 0.0 0.969372 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0140586 0.0 0.168841 Low Low

0 Strain