Gene : Eucgr.H04993 E. grandis v2.0
Defline:  (1 of 235) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1484
Name:  ? Eucgr.H04993 Secondary Identifier:  ? PAC:32070314
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04993 0.5kb upstream 0.5kb upstream 3330 true Chr07: 36579114-36582443 Eucalyptus grandis
Eucgr.H04993 0.5kb upstream 0.5kb upstream 500 false Chr07: 36579114-36579613 Eucalyptus grandis
Eucgr.H04993 0.5kb downstream 0.5kb downstream 3330 true Chr07: 36579614-36582943 Eucalyptus grandis
Eucgr.H04993 0.5kb downstream 0.5kb downstream 500 false Chr07: 36582444-36582943 Eucalyptus grandis
Eucgr.H04993 1.0kb upstream 1.0kb upstream 3830 true Chr07: 36578614-36582443 Eucalyptus grandis
Eucgr.H04993 1.0kb upstream 1.0kb upstream 1000 false Chr07: 36578614-36579613 Eucalyptus grandis
Eucgr.H04993 1.0kb downstream 1.0kb downstream 3830 true Chr07: 36579614-36583443 Eucalyptus grandis
Eucgr.H04993 1.0kb downstream 1.0kb downstream 1000 false Chr07: 36582444-36583443 Eucalyptus grandis
Eucgr.H04993 2.0kb upstream 2.0kb upstream 4830 true Chr07: 36577614-36582443 Eucalyptus grandis
Eucgr.H04993 2.0kb upstream 2.0kb upstream 2000 false Chr07: 36577614-36579613 Eucalyptus grandis
Eucgr.H04993 2.0kb downstream 2.0kb downstream 4830 true Chr07: 36579614-36584443 Eucalyptus grandis
Eucgr.H04993 2.0kb downstream 2.0kb downstream 2000 false Chr07: 36582444-36584443 Eucalyptus grandis
Eucgr.H04993 5.0kb upstream 5.0kb upstream 7830 true Chr07: 36574614-36582443 Eucalyptus grandis
Eucgr.H04993 5.0kb upstream 5.0kb upstream 5000 false Chr07: 36574614-36579613 Eucalyptus grandis
Eucgr.H04993 5.0kb downstream 5.0kb downstream 7830 true Chr07: 36579614-36587443 Eucalyptus grandis
Eucgr.H04993 5.0kb downstream 5.0kb downstream 5000 false Chr07: 36582444-36587443 Eucalyptus grandis
Eucgr.H04993 10.0kb upstream 10.0kb upstream 12830 true Chr07: 36569614-36582443 Eucalyptus grandis
Eucgr.H04993 10.0kb upstream 10.0kb upstream 10000 false Chr07: 36569614-36579613 Eucalyptus grandis
Eucgr.H04993 10.0kb downstream 10.0kb downstream 12830 true Chr07: 36579614-36592443 Eucalyptus grandis
Eucgr.H04993 10.0kb downstream 10.0kb downstream 10000 false Chr07: 36582444-36592443 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062465 5270 Rosid View MSA
123739222 5271 Pentapetalae View MSA
122787096 5272 Eudicot View MSA
122044895 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121350963 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.20048 0.0 3.21466    
cufflinks 0.427067 0.0 1.2638 Low Low
cufflinks 1.75689 0.0 4.51294    
cufflinks 2.2205 0.0 5.53384   High
cufflinks 1.3701 0.0 3.61061    
cufflinks 1.21034 0.0 3.25286    

0 Strain